Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009187 Carpinus fangiana HOM05D000054 ORTHO05D005077 9.3e-34 146.4 77 100.0
Cfa001071 Carpinus fangiana HOM05D000054 ORTHO05D005077 4.3e-23 110.9 67 88.1
Haze_18380 Corylus avellana HOM05D000054 ORTHO05D000171 5.7e-23 110.5 67 88.1
Haze_05416 Corylus avellana HOM05D000054 ORTHO05D000171 3.7e-22 107.8 67 83.6
Haze_05420 Corylus avellana HOM05D000054 ORTHO05D005077 3.7e-22 107.8 67 82.1
Haze_05434 Corylus avellana HOM05D000054 ORTHO05D000171 4.8e-22 107.5 67 85.1
Haze_05421 Corylus avellana HOM05D000072 ORTHO05D000026 1.8e-21 105.5 67 80.6
Cfa001078 Carpinus fangiana HOM05D000054 ORTHO05D005077 2.4e-21 105.1 67 80.6
Cfa001087 Carpinus fangiana HOM05D000054 ORTHO05D005077 3.1e-21 104.8 67 80.6
Haze_05895 Corylus avellana HOM05D000054 ORTHO05D005077 2.6e-20 101.7 67 77.6
Haze_05438 Corylus avellana HOM05D000054 ORTHO05D000171 7.6e-20 100.1 67 77.6
Cfa001073 Carpinus fangiana HOM05D000054 ORTHO05D002584 1.0e-19 99.8 67 77.6
Haze_05417 Corylus avellana HOM05D000054 ORTHO05D000171 1.0e-19 99.8 69 75.4
Haze_05422 Corylus avellana HOM05D000054 ORTHO05D002584 1.3e-19 99.4 67 79.1
Cfa001074 Carpinus fangiana HOM05D000054 ORTHO05D005077 2.1e-17 92.0 67 73.1
Haze_04966 Corylus avellana HOM05D000054 ORTHO05D005077 3.0e-16 88.2 66 72.7
Haze_05433 Corylus avellana HOM05D000054 ORTHO05D000171 3.9e-16 87.8 67 71.6
Cfa001076 Carpinus fangiana HOM05D000054 ORTHO05D005077 4.3e-15 84.3 67 67.2
Cfa001081 Carpinus fangiana HOM05D000054 ORTHO05D005077 3.7e-14 81.3 67 68.7
CiPaw.09G134200 Carya illinoinensis HOM05D000054 ORTHO05D000171 8.2e-14 80.1 68 61.8
CiPaw.09G134300 Carya illinoinensis HOM05D000054 ORTHO05D000171 4.1e-13 77.8 67 62.7
Haze_05439 Corylus avellana HOM05D000054 ORTHO05D000171 7.7e-12 73.6 67 58.2
TWI73G0043 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 3.8e-11 71.2 67 53.7
Cfa001070 Carpinus fangiana HOM05D000054 ORTHO05D002584 5.0e-11 70.9 67 59.7
CiPaw.09G134000 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.1e-10 69.7 69 58.0
Haze_05440 Corylus avellana HOM05D000054 ORTHO05D000171 1.1e-10 69.7 67 55.2
Prupe.4G069600 Prunus persica HOM05D000054 ORTHO05D000171 1.9e-10 68.9 71 53.5
CiPaw.09G134100 Carya illinoinensis HOM05D000054 ORTHO05D000171 2.5e-10 68.6 68 55.9
Prupe.4G069400 Prunus persica HOM05D000054 ORTHO05D000171 2.5e-10 68.6 71 52.1
MD10G1273200 Malus domestica HOM05D000054 ORTHO05D000171 3.2e-10 68.2 71 50.7
TAR627G0417 Trochodendron aralioides HOM05D000054 ORTHO05D000171 4.2e-10 67.8 67 52.2
FvH4_3g07044 Fragaria vesca HOM05D000054 ORTHO05D000171 9.4e-10 66.6 68 55.9
QL04p017520 Quercus lobata HOM05D000054 ORTHO05D000171 9.4e-10 66.6 67 53.7
QL05p051919 Quercus lobata HOM05D000054 ORTHO05D000171 9.4e-10 66.6 67 53.7
QL05p051832 Quercus lobata HOM05D000054 ORTHO05D000171 2.1e-09 65.5 66 53.0
TWI73G0590 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 2.7e-09 65.1 69 53.6
TAR627G0377 Trochodendron aralioides HOM05D000054 ORTHO05D005077 2.7e-09 65.1 67 50.7
FAN11G3361 Fragaria x ananassa HOM05D000054 ORTHO05D000171 4.6e-09 64.3 71 46.5
QL05p051190 Quercus lobata HOM05D000054 ORTHO05D000171 7.9e-09 63.5 67 52.2
QL05p051710 Quercus lobata HOM05D000054 ORTHO05D000171 7.9e-09 63.5 66 51.5
QL04p017501 Quercus lobata HOM05D000054 ORTHO05D000171 1.0e-08 63.2 67 52.2
QL05p051693 Quercus lobata HOM05D000054 ORTHO05D000171 1.0e-08 63.2 68 55.9
QL05p051904 Quercus lobata HOM05D000054 ORTHO05D000171 1.0e-08 63.2 67 52.2
RcHm_v2.0_Chr5g0034051 Rosa chinensis HOM05D000054 ORTHO05D000171 1.4e-08 62.8 66 51.5
Haze_23793 Corylus avellana HOM05D000054 ORTHO05D005077 1.8e-08 62.4 66 53.0
Gorai.009G159500 Gossypium raimondii HOM05D000054 ORTHO05D000171 1.8e-08 62.4 69 43.5
QL11p052141 Quercus lobata HOM05D000054 ORTHO05D005077 1.8e-08 62.4 68 50.0
GSVIVG01021283001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.8e-08 62.4 67 56.7
MD00G1006500 Malus domestica HOM05D000054 ORTHO05D000171 2.3e-08 62.0 69 52.2
QL05p051513 Quercus lobata HOM05D000054 ORTHO05D000171 2.3e-08 62.0 68 51.5
RcHm_v2.0_Chr5g0034091 Rosa chinensis HOM05D000054 ORTHO05D000171 2.3e-08 62.0 71 46.5
Gohir.D05G155260 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.0e-08 61.6 69 43.5
Gorai.009G159400 Gossypium raimondii HOM05D000054 ORTHO05D000171 3.0e-08 61.6 69 43.5
QL05p052283 Quercus lobata HOM05D000054 ORTHO05D000171 3.0e-08 61.6 67 49.3
FAN25G2159 Fragaria x ananassa HOM05D000054 ORTHO05D005077 3.9e-08 61.2 72 52.8
RcHm_v2.0_Chr5g0012191 Rosa chinensis HOM05D000054 ORTHO05D005077 3.9e-08 61.2 71 47.9
FAN21G3729 Fragaria x ananassa HOM05D000054 ORTHO05D000171 5.1e-08 60.8 58 51.7
MD00G1006600 Malus domestica HOM05D000054 ORTHO05D000171 5.1e-08 60.8 67 50.7
Potri.011G072866 Populus trichocarpa HOM05D000054 ORTHO05D000171 5.1e-08 60.8 67 49.3
FvH4_3g06940 Fragaria vesca HOM05D000054 ORTHO05D000171 6.7e-08 60.5 67 52.2
FvH4_3g20230 Fragaria vesca HOM05D000054 ORTHO05D000171 6.7e-08 60.5 71 50.7
RcHm_v2.0_Chr5g0012261 Rosa chinensis HOM05D000054 ORTHO05D000171 6.7e-08 60.5 76 48.7
FAN25G0756 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.8e-08 60.1 76 46.1
MD10G1273300 Malus domestica HOM05D000054 ORTHO05D000171 8.8e-08 60.1 67 52.2
Potri.011G072666 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.1e-07 59.7 67 47.8
Gohir.A05G152600 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.5e-07 59.3 69 42.0
MD05G1295100 Malus domestica HOM05D000054 ORTHO05D005077 1.5e-07 59.3 70 51.4
Gorai.009G159600 Gossypium raimondii HOM05D000054 ORTHO05D000171 2.0e-07 58.9 71 45.1
QL05p050621 Quercus lobata HOM05D000054 ORTHO05D005077 2.0e-07 58.9 67 46.3
FvH4_3g06840 Fragaria vesca HOM05D000054 ORTHO05D000171 2.6e-07 58.5 76 46.1
FAN11G3923 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.6e-07 58.5 76 46.1
FAN16G2145 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.6e-07 58.5 76 46.1
FAN21G0001 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.6e-07 58.5 76 46.1
Potri.011G072741 Populus trichocarpa HOM05D000054 ORTHO05D000171 2.6e-07 58.5 67 46.3
RcHm_v2.0_Chr1g0336311 Rosa chinensis HOM05D000054 ORTHO05D000171 2.6e-07 58.5 66 53.0
RcHm_v2.0_Chr5g0012221 Rosa chinensis HOM05D000054 ORTHO05D000171 2.6e-07 58.5 72 51.4
Potri.011G073091 Populus trichocarpa HOM05D000054 ORTHO05D000171 3.3e-07 58.2 67 47.8
FvH4_3g07041 Fragaria vesca HOM05D000054 ORTHO05D000171 4.4e-07 57.8 68 54.4
Potri.011G073516 Populus trichocarpa HOM05D000054 ORTHO05D000171 4.4e-07 57.8 67 46.3
Prupe.4G069700 Prunus persica HOM05D000054 ORTHO05D000171 4.4e-07 57.8 69 50.7
QL05p051098 Quercus lobata HOM05D000054 ORTHO05D005077 4.4e-07 57.8 75 49.3
Potri.011G072941 Populus trichocarpa HOM05D000054 ORTHO05D000171 5.7e-07 57.4 67 46.3
Potri.011G073066 Populus trichocarpa HOM05D000054 ORTHO05D000171 5.7e-07 57.4 66 45.5
CiPaw.10G101400 Carya illinoinensis HOM05D000054 ORTHO05D000171 7.4e-07 57.0 67 49.3
Gohir.A05G152675 Gossypium hirsutum HOM05D000054 ORTHO05D005077 7.4e-07 57.0 71 45.1
Gohir.A12G042380 Gossypium hirsutum HOM05D000054 ORTHO05D000171 7.4e-07 57.0 69 42.0
Potri.011G072591 Populus trichocarpa HOM05D000054 ORTHO05D000171 7.4e-07 57.0 67 46.3
Potri.011G073191 Populus trichocarpa HOM05D000054 ORTHO05D000171 7.4e-07 57.0 67 46.3
Potri.011G073241 Populus trichocarpa HOM05D000054 ORTHO05D000171 7.4e-07 57.0 67 46.3
TAR627G0751 Trochodendron aralioides HOM05D000054 ORTHO05D000171 7.4e-07 57.0 67 46.3
GSVIVG01021289001 Vitis vinifera HOM05D000054 ORTHO05D000171 7.4e-07 57.0 68 55.9
FvH4_3g06960 Fragaria vesca HOM05D000054 ORTHO05D000171 9.7e-07 56.6 72 51.4
FAN21G0360 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.3e-06 56.2 72 50.0
FAN21G2359 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.3e-06 56.2 72 50.0
Potri.011G072991 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.3e-06 56.2 67 46.3
FAN21G0760 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.7e-06 55.8 72 50.0
FAN21G1730 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.7e-06 55.8 72 50.0
FAN21G2154 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.7e-06 55.8 72 50.0
Gohir.D05G155340 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.7e-06 55.8 71 43.7
Prupe.4G069300 Prunus persica HOM05D000054 ORTHO05D000171 1.7e-06 55.8 72 48.6
RcHm_v2.0_Chr5g0034071 Rosa chinensis HOM05D000054 ORTHO05D000171 1.7e-06 55.8 67 46.3
MD05G1294500 Malus domestica HOM05D000054 ORTHO05D000171 2.2e-06 55.5 67 49.3
RcHm_v2.0_Chr5g0012201 Rosa chinensis HOM05D000054 ORTHO05D000171 2.2e-06 55.5 72 50.0
RcHm_v2.0_Chr5g0012251 Rosa chinensis HOM05D000054 ORTHO05D000171 2.2e-06 55.5 68 50.0
CSS0039784 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.8e-06 55.1 66 45.5
Cfa001091 Carpinus fangiana HOM05D000054 ORTHO05D005077 2.8e-06 55.1 40 62.5
RcHm_v2.0_Chr5g0012241 Rosa chinensis HOM05D000054 ORTHO05D000171 2.8e-06 55.1 72 50.0
QL11p052170 Quercus lobata HOM05D000054 ORTHO05D000171 3.7e-06 54.7 67 52.2
CiPaw.10G101500 Carya illinoinensis HOM05D000054 ORTHO05D000171 4.8e-06 54.3 60 50.0
COL.COLO4_22838 Corchorus olitorius HOM05D000054 ORTHO05D005077 4.8e-06 54.3 60 48.3
Haze_05415 Corylus avellana HOM05D000054 ORTHO05D000171 4.8e-06 54.3 40 62.5
FAN25G2782 Fragaria x ananassa HOM05D000054 ORTHO05D000171 4.8e-06 54.3 67 47.8
Potri.011G073366 Populus trichocarpa HOM05D000054 ORTHO05D000171 4.8e-06 54.3 67 46.3
QL05p051155 Quercus lobata HOM05D000054 ORTHO05D000171 4.8e-06 54.3 68 50.0
QL05p051666 Quercus lobata HOM05D000054 ORTHO05D000171 4.8e-06 54.3 68 50.0
CSS0013941 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 6.3e-06 53.9 67 44.8
Potri.011G075400 Populus trichocarpa HOM05D000054 ORTHO05D000171 6.3e-06 53.9 67 44.8
Duzib235G1227 Durio zibethinus HOM05D000054 ORTHO05D000171 8.2e-06 53.5 76 43.4
FvH4_3g06860 Fragaria vesca HOM05D000054 ORTHO05D000171 8.2e-06 53.5 72 50.0
FAN21G3268 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.2e-06 53.5 72 50.0
Thecc.06G161900 Theobroma cacao HOM05D000054 ORTHO05D000171 8.2e-06 53.5 67 47.8


User provided reference genes

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