Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 3.9e-45 184.5 98 100.0
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 3.2e-31 138.3 97 80.4
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 2.7e-30 135.2 98 75.5
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 3.5e-25 118.2 108 63.9
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 2.9e-24 115.2 108 66.7
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 3.8e-24 114.8 108 65.7
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 8.5e-24 113.6 108 63.9
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 2.5e-23 112.1 105 62.9
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 4.2e-23 111.3 108 63.9
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 5.5e-23 110.9 108 63.0
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 1.2e-22 109.8 109 62.4
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.6e-22 109.4 108 62.0
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.6e-22 109.4 108 62.0
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 2.1e-22 109.0 113 62.8
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 4.0e-21 104.8 109 60.6
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 8.8e-21 103.6 108 62.0
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 2.0e-20 102.4 105 59.0
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 3.3e-20 101.7 110 60.9
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 4.4e-20 101.3 108 60.2
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 5.7e-20 100.9 103 57.3
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 7.4e-20 100.5 106 61.3
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 7.4e-20 100.5 108 59.3
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 9.7e-20 100.1 107 59.8
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 1.3e-19 99.8 108 58.3
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 1.7e-19 99.4 104 60.6
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 1.7e-19 99.4 104 56.7
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 2.2e-19 99.0 108 55.6
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 2.8e-19 98.6 110 60.0
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 6.3e-19 97.4 101 60.4
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 1.1e-18 96.7 104 58.7
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 1.1e-18 96.7 105 57.1
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 7.0e-18 94.0 99 55.6
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 9.1e-18 93.6 104 55.8
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 1.6e-17 92.8 104 54.8
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 5.9e-17 90.9 104 53.8
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 7.7e-17 90.5 100 54.0
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 1.7e-16 89.4 108 53.7
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 5.0e-16 87.8 113 52.2
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 6.5e-16 87.4 103 56.3
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 6.5e-16 87.4 116 54.3
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 1.9e-15 85.9 103 53.4
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 1.9e-15 85.9 113 57.5
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 2.5e-15 85.5 105 51.4
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 7.2e-15 84.0 109 51.4
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 9.4e-15 83.6 93 52.7
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 1.2e-14 83.2 107 50.5
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 2.1e-14 82.4 110 52.7
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 2.7e-14 82.0 108 51.9
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 2.7e-14 82.0 102 52.0
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 3.6e-14 81.6 110 51.8
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 4.7e-14 81.3 101 49.5
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 4.7e-14 81.3 108 50.0
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 8.0e-14 80.5 110 51.8
arahy.Tifrunner.gnm1.ann1.F37JRW Arachis hypogaea HOM05D007293 ORTHO05D009143 3.0e-13 78.6 97 55.7
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 4.0e-13 78.2 97 51.5
FAN07G2443 Fragaria x ananassa HOM05D007293 ORTHO05D009143 4.0e-13 78.2 91 58.2
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 1.2e-12 76.6 103 51.5
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.5e-12 76.3 97 50.5
arahy.Tifrunner.gnm1.ann1.HDCN36 Arachis hypogaea HOM05D007293 ORTHO05D009143 2.0e-12 75.9 97 54.6
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 2.0e-12 75.9 111 52.3
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 3.4e-12 75.1 111 50.5
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 3.4e-12 75.1 114 49.1
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 4.4e-12 74.7 107 52.3
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 1.7e-11 72.8 108 48.1
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 1.7e-11 72.8 108 48.1
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.2e-11 72.4 106 50.9
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 2.2e-11 72.4 49 79.6
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 2.2e-11 72.4 107 48.6
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 2.2e-11 72.4 107 50.5
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 2.8e-11 72.0 106 50.9
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 2.8e-11 72.0 109 47.7
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 3.7e-11 71.6 102 50.0
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 8.3e-11 70.5 106 47.2
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.4e-10 69.7 49 77.6
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 1.8e-10 69.3 108 42.6
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 1.8e-10 69.3 112 49.1
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 3.1e-10 68.6 48 77.1
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 4.1e-10 68.2 102 45.1
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 4.1e-10 68.2 108 46.3
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 4.1e-10 68.2 108 46.3
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 4.1e-10 68.2 102 45.1
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 7.0e-10 67.4 103 50.5
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 7.0e-10 67.4 105 47.6
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 5.9e-09 64.3 102 50.0
Medtr5g034360 Medicago truncatula HOM05D007293 ORTHO05D009143 5.9e-09 64.3 100 44.0
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 7.7e-09 63.9 102 45.1
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 1.3e-08 63.2 101 47.5
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 1.3e-08 63.2 104 49.0
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 1.7e-08 62.8 101 43.6
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 2.2e-08 62.4 93 50.5
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.2e-08 62.4 104 41.3
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 2.2e-08 62.4 105 47.6
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 2.9e-08 62.0 105 46.7
Zm00001eb153880 Zea mays HOM05D007293 ORTHO05D009143 2.9e-08 62.0 102 47.1
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 5.0e-08 61.2 102 46.1
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 6.5e-08 60.8 106 47.2
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 8.5e-08 60.5 93 46.2
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.1e-07 60.1 101 48.5
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 2.5e-07 58.9 90 46.7
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 4.2e-07 58.2 46 67.4
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 4.2e-07 58.2 99 49.5
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 1.2e-06 56.6 100 41.0
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 3.6e-06 55.1 84 50.0
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.7e-06 54.7 106 40.6
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 4.7e-06 54.7 71 49.3


User provided reference genes

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