Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009056 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.2e-274 949.1 443 100.0
Cfa009350 Carpinus fangiana HOM05D009398 ORTHO05D011511 9.4e-54 215.3 400 39.8
Haze_12398 Corylus avellana HOM05D009398 ORTHO05D011511 3.0e-52 210.3 378 39.9
Cfa009419 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.8e-47 193.4 348 40.8
Cfa009048 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.5e-47 192.6 306 44.8
Haze_12403 Corylus avellana HOM05D009398 ORTHO05D011511 2.6e-43 180.6 396 37.6
Haze_12327 Corylus avellana HOM05D009398 ORTHO05D011511 4.4e-43 179.9 368 37.8
Haze_12353 Corylus avellana HOM05D009398 ORTHO05D011511 1.9e-38 164.5 374 36.4
Cfa005300 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.2e-38 163.3 298 39.3
Haze_12078 Corylus avellana HOM05D009398 ORTHO05D011511 3.0e-36 157.1 288 41.3
Haze_12354 Corylus avellana HOM05D009398 ORTHO05D011511 5.2e-36 156.4 303 38.9
Cfa009423 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.4e-35 153.3 374 32.9
Cfa008760 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.1e-33 146.7 371 35.6
Cfa009357 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.6e-29 134.8 197 44.2
Cfa009296 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.0e-28 130.2 314 35.7
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 2.4e-25 120.9 417 28.8
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 2.4e-25 120.9 414 28.5
Cfa009360 Carpinus fangiana HOM05D009398 ORTHO05D011511 8.0e-21 105.9 230 37.4
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 3.2e-17 94.0 341 30.5
Cfa009305 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.2e-16 92.0 364 29.4
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 2.7e-16 90.9 351 29.9
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 1.5e-14 85.1 380 26.6
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.5e-14 84.3 380 26.6
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 7.3e-14 82.8 362 27.1
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 8.0e-13 79.3 385 26.5
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 7.5e-11 72.8 345 26.4
Aqoxy4G00673 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 2.2e-10 71.2 183 30.6
Haze_12406 Corylus avellana HOM05D009398 ORTHO05D011511 4.9e-10 70.1 82 45.1
PSO063G2674 Papaver somniferum HOM05D000007 ORTHO05D000676 1.9e-09 68.2 216 27.3
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.9e-09 68.2 281 27.4
CANSAT54G2030 Cannabis sativa HOM05D014652 ORTHO05D000039 1.6e-08 65.1 186 28.5
Eucgr.B03075 Eucalyptus grandis HOM05D000171 ORTHO05D000101 2.7e-08 64.3 342 24.3
PSO135G0644 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-08 64.3 242 27.3
Peaxi162Scf00009g02613 Petunia axillaris HOM05D000007 ORTHO05D000017 4.6e-08 63.5 264 23.9
RcHm_v2.0_Chr4g0399251 Rosa chinensis HOM05D000007 ORTHO05D009073 4.6e-08 63.5 224 29.0
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 6.0e-08 63.2 238 25.2
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 6.0e-08 63.2 189 24.3
Eucgr.G00214 Eucalyptus grandis HOM05D000171 ORTHO05D000101 7.8e-08 62.8 303 22.8
PSO063G5505 Papaver somniferum HOM05D004049 ORTHO05D004496 1.3e-07 62.0 334 26.0
PSO384G0078 Papaver somniferum HOM05D008241 ORTHO05D011047 1.3e-07 62.0 252 27.8
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.3e-07 61.2 234 24.4
Potri.011G137200 Populus trichocarpa HOM05D000007 ORTHO05D000521 2.3e-07 61.2 234 24.4
Prupe.6G294100 Prunus persica HOM05D000007 ORTHO05D000039 2.3e-07 61.2 257 25.7
PGR119G0108 Punica granatum HOM05D000171 ORTHO05D000101 2.3e-07 61.2 178 29.8
HanXRQChr07g0189381 Helianthus annuus HOM05D000007 ORTHO05D009073 3.0e-07 60.8 248 26.6
QL07p033575 Quercus lobata HOM05D000007 ORTHO05D003666 3.9e-07 60.5 184 29.9
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 1.1e-06 58.9 249 26.5
HanXRQChr05g0146451 Helianthus annuus HOM05D000007 ORTHO05D009073 1.1e-06 58.9 380 20.8
Sabra11G0123100 Salix brachista HOM05D000007 ORTHO05D000521 1.1e-06 58.9 181 26.0
Aqoxy3G01081 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.5e-06 58.5 164 31.1
HanXRQChr02g0049881 Helianthus annuus HOM05D000007 ORTHO05D009073 1.5e-06 58.5 188 30.3
Aqoxy5G00817 Aquilegia oxysepala HOM05D021765 ORTHO05D018413 1.9e-06 58.2 186 33.3
AL1G54130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.9e-06 58.2 186 26.9
Lsat_1_v5_gn_7_53901 Lactuca sativa HOM05D000007 ORTHO05D000039 1.9e-06 58.2 182 30.2
Eucgr.G00229 Eucalyptus grandis HOM05D000171 ORTHO05D000101 2.5e-06 57.8 223 23.8
FAN07G2472 Fragaria x ananassa HOM05D009792 ORTHO05D009073 3.3e-06 57.4 272 24.6
HanXRQChr05g0146381 Helianthus annuus HOM05D000171 ORTHO05D009073 3.3e-06 57.4 266 24.4
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.3e-06 56.2 176 26.1
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 7.3e-06 56.2 384 23.2
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 7.3e-06 56.2 235 26.0


User provided reference genes

Program Settings