Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 7.7e-275 949.9 490 100.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 4.1e-260 901.0 490 92.4
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.6e-217 757.7 488 77.7
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 2.7e-187 659.1 500 66.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.1e-183 647.1 476 66.8
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 2.9e-181 639.0 493 68.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.2e-180 635.6 492 66.5
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 7.2e-180 634.4 492 63.8
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 2.1e-179 632.9 500 65.8
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 7.9e-179 630.9 498 64.9
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.4e-178 630.2 482 65.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 2.3e-178 629.4 491 66.4
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 2.0e-177 626.3 491 65.6
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 4.8e-176 621.7 493 62.9
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.3e-173 613.6 493 64.3
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.7e-173 613.2 493 62.3
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.9e-172 609.8 478 64.2
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 9.4e-172 607.4 498 61.8
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 2.6e-169 599.4 498 63.5
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-169 598.2 487 64.1
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.2e-168 596.3 495 64.0
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.8e-168 595.1 490 63.9
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 4.8e-168 595.1 505 62.6
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 8.2e-168 594.3 490 63.9
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.1e-167 592.4 486 63.6
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 9.1e-167 590.9 498 63.5
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 7.7e-166 587.8 444 66.2
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.1e-164 583.9 494 61.7
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.0e-162 575.9 486 60.5
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 5.2e-162 575.1 502 59.6
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.6e-161 572.8 475 60.8
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.4e-161 572.0 502 61.2
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.4e-161 572.0 502 61.2
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 5.7e-161 571.6 499 59.5
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 7.4e-161 571.2 472 60.8
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.2e-160 569.7 502 59.0
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.1e-159 567.4 505 58.8
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 7.0e-159 564.7 474 61.4
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.6e-158 563.5 505 59.0
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 8.5e-157 557.8 513 58.3
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 4.0e-154 548.9 379 70.7
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 8.8e-154 547.7 498 60.6
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.4e-153 545.8 487 58.3
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 3.4e-153 545.8 504 57.7
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-152 543.9 504 57.3
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.7e-152 542.3 498 60.4
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 6.3e-152 541.6 482 61.0
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.6e-150 537.0 498 56.6
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 1.6e-150 537.0 499 60.1
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.7e-149 533.5 364 70.9
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 3.8e-149 532.3 498 58.6
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.1e-148 530.8 507 56.8
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 4.2e-148 528.9 475 58.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 9.4e-148 527.7 508 56.3
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.4e-146 523.9 472 59.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.2e-145 520.8 493 56.8
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.5e-145 520.4 505 55.0
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.0e-145 520.0 497 55.1
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.4e-145 519.2 506 54.5
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.4e-143 513.8 464 57.5
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.8e-143 513.5 382 66.0
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 3.1e-143 512.7 466 57.9
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.1e-143 512.7 468 56.6
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 1.6e-142 510.4 461 58.1
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 7.7e-142 508.1 484 56.2
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 7.7e-142 508.1 495 57.8
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.3e-141 507.3 470 56.4
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 8.6e-141 504.6 498 58.0
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.1e-140 504.2 461 57.0
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 3.3e-140 502.7 461 59.0
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.5e-140 501.9 374 63.9
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 7.2e-140 501.5 514 54.9
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 3.6e-139 499.2 465 57.0
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 4.7e-139 498.8 441 58.7
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 8.0e-139 498.0 454 56.6
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 4.0e-138 495.7 503 55.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-137 493.8 488 54.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.6e-137 493.0 456 57.7
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.6e-137 493.0 456 57.7
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.6e-137 493.0 456 57.7
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 2.6e-137 493.0 503 54.9
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 4.4e-137 492.3 454 57.5
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.4e-137 492.3 493 55.6
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-137 491.9 488 54.7
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 7.5e-137 491.5 494 53.4
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.9e-136 488.8 493 55.4
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.0e-134 483.4 451 57.2
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.7e-133 480.3 494 53.6
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.9e-133 479.6 496 53.8
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 3.9e-133 479.2 497 53.7
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 5.0e-133 478.8 493 53.8
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.6e-131 473.8 433 56.6
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.0e-130 471.1 479 53.9
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.2e-126 457.6 449 55.7
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 8.6e-125 451.4 474 52.1
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.2e-123 447.6 461 53.1
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.5e-121 440.7 438 50.7
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 7.8e-118 428.3 501 48.1
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.2e-106 389.0 483 48.4
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.2e-104 383.6 453 43.7
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.4e-98 363.6 330 57.6
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 4.6e-86 322.8 494 41.7
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.8e-80 303.1 290 55.5
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.7e-78 297.0 207 64.7
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 4.3e-76 289.7 363 44.6
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 3.7e-75 286.6 357 45.1
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 8.2e-75 285.4 337 50.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 3.3e-68 263.5 397 39.8
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 6.9e-58 229.2 315 42.9
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 9.4e-55 218.8 392 37.2
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 2.6e-52 210.7 223 52.9
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 7.0e-34 149.4 184 50.0
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 6.5e-32 142.9 113 63.7
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.6e-30 138.3 396 31.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.1e-30 136.3 395 31.4
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.2e-28 132.1 129 54.3
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.2e-25 122.1 397 29.5
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.6e-25 121.7 390 29.7
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.5e-23 115.2 335 32.8
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.0e-20 104.8 57 78.9
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 8.6e-08 62.8 40 65.0


User provided reference genes

Program Settings