Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 7.4e-93 344.0 188 100.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 5.5e-80 301.2 192 89.6
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 2.7e-66 255.8 187 73.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 3.0e-62 242.3 188 72.3
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 6.1e-55 218.0 182 63.2
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 8.0e-55 217.6 193 65.3
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 4.9e-52 208.4 178 63.5
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 6.4e-52 208.0 188 61.7
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.1e-51 207.2 185 63.8
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.4e-51 206.1 190 62.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 2.4e-51 206.1 193 61.7
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 2.7e-50 202.6 195 62.1
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.7e-49 199.9 133 73.7
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 1.7e-49 199.9 191 57.1
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 3.9e-49 198.7 186 57.5
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 6.6e-49 198.0 130 75.4
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.1e-48 197.2 127 77.2
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.5e-48 196.8 128 75.8
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.9e-48 196.4 186 59.1
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.9e-48 196.4 186 58.1
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.3e-48 195.7 129 75.2
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 3.3e-48 195.7 163 62.6
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 4.3e-48 195.3 127 76.4
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 7.3e-48 194.5 193 57.0
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.6e-47 193.4 195 56.4
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.6e-47 193.4 195 56.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.6e-47 193.4 203 55.7
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 2.8e-47 192.6 126 76.2
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 2.8e-47 192.6 185 56.8
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.6e-47 192.2 129 74.4
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 4.7e-47 191.8 130 73.8
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 4.7e-47 191.8 132 69.7
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 6.2e-47 191.4 167 58.7
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 8.0e-47 191.0 170 64.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 8.0e-47 191.0 134 70.9
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-46 190.7 167 58.7
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.4e-46 190.3 192 59.9
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.8e-46 189.9 127 74.8
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 2.3e-46 189.5 199 59.3
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 3.1e-46 189.1 184 58.2
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 5.2e-46 188.3 127 70.9
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 5.2e-46 188.3 168 62.5
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 1.5e-45 186.8 174 55.7
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.6e-45 186.0 123 74.0
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.6e-45 186.0 185 56.2
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.3e-44 183.7 133 69.2
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.3e-44 183.7 186 55.4
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 1.7e-44 183.3 186 56.5
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.2e-44 183.0 123 72.4
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 2.9e-44 182.6 123 73.2
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 3.7e-44 182.2 192 52.6
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 4.9e-44 181.8 133 67.7
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 8.3e-44 181.0 123 71.5
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.1e-43 180.6 121 72.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 2.4e-43 179.5 123 69.9
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 4.1e-43 178.7 140 66.4
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 4.1e-43 178.7 135 65.9
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 5.4e-43 178.3 196 51.0
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 7.0e-43 177.9 123 69.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.6e-42 176.8 180 56.1
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 2.0e-42 176.4 122 70.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 2.7e-42 176.0 123 69.9
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.7e-42 176.0 123 69.9
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.6e-42 175.3 186 53.8
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 4.6e-42 175.3 122 68.0
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 6.0e-42 174.9 191 55.5
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 7.8e-42 174.5 163 58.3
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 1.0e-41 174.1 130 68.5
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.3e-41 173.7 108 79.6
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.0e-41 172.6 179 52.5
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 5.0e-41 171.8 186 56.5
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 5.0e-41 171.8 123 69.1
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 6.6e-41 171.4 126 69.0
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 6.6e-41 171.4 128 67.2
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.6e-41 171.0 134 65.7
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 1.1e-40 170.6 124 66.9
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.5e-40 170.2 120 70.0
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.9e-40 169.9 124 67.7
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 3.3e-40 169.1 124 66.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.3e-40 169.1 120 70.0
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 5.6e-40 168.3 124 66.9
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 5.6e-40 168.3 121 66.9
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 7.3e-40 167.9 133 63.9
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.6e-39 166.8 131 61.8
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.6e-39 166.8 179 52.0
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.7e-39 165.2 124 64.5
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 4.7e-39 165.2 133 62.4
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 4.7e-39 165.2 133 62.4
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 4.7e-39 165.2 133 62.4
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 4.7e-39 165.2 133 62.4
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 4.7e-39 165.2 133 62.4
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.3e-38 162.9 123 65.9
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 3.1e-38 162.5 119 68.1
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.0e-37 159.8 125 63.2
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.6e-37 159.5 124 62.9
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 5.8e-37 158.3 103 72.8
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 4.6e-34 148.7 117 62.4
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.0e-34 148.3 116 62.9
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.9e-32 143.3 120 58.3
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.1e-30 137.5 99 70.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.2e-28 129.8 103 65.0
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.2e-28 129.8 103 65.0
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.2e-28 129.8 103 65.0
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.6e-26 123.6 84 77.4
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 5.1e-25 118.6 83 73.5
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 6.6e-25 118.2 126 50.8
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 9.0e-22 107.8 120 50.0
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 3.8e-20 102.4 81 61.7
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 4.9e-20 102.1 119 47.1
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 3.0e-17 92.8 119 46.2
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.6e-15 85.9 70 62.9
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 2.0e-13 80.1 118 37.3
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 6.4e-12 75.1 48 66.7
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 2.3e-09 66.6 128 39.1


User provided reference genes

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