Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 0.0e+00 1736.9 948 100.0
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 0.0e+00 1236.5 866 79.1
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 0.0e+00 1169.1 952 68.5
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 0.0e+00 1156.4 952 69.9
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 0.0e+00 1154.0 933 68.9
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 0.0e+00 1142.9 951 68.2
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 0.0e+00 1139.0 950 67.6
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 0.0e+00 1135.6 957 67.5
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 0.0e+00 1133.6 957 69.4
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 0.0e+00 1129.8 967 68.7
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 0.0e+00 1110.9 951 67.4
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 0.0e+00 1109.4 948 67.2
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 0.0e+00 1107.0 931 68.3
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 0.0e+00 1101.7 951 67.5
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 0.0e+00 1082.8 958 67.0
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 6.5e-312 1074.7 968 66.4
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 6.5e-312 1074.3 1016 62.7
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 2.6e-311 1072.0 947 65.6
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 4.9e-310 1067.8 962 66.3
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 7.8e-308 1060.4 941 64.9
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 2.3e-307 1058.9 994 63.8
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 3.1e-304 1048.5 964 65.6
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 3.1e-304 1048.5 963 65.2
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.9e-299 1031.6 934 64.8
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 3.3e-298 1028.5 956 64.0
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 1.3e-297 1026.5 922 65.0
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 4.8e-297 1024.6 933 63.9
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.4e-296 1023.1 956 63.9
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 2.4e-296 1022.3 942 65.0
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 2.2e-294 1015.8 1080 58.0
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.1e-290 1003.4 949 62.6
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 1.5e-290 1003.0 932 63.2
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 2.4e-288 995.7 949 65.3
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.0e-286 990.3 942 62.2
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.1e-285 986.9 977 60.0
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.5e-285 985.7 952 61.2
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 5.5e-285 984.6 966 62.5
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 3.9e-283 978.4 943 61.5
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 8.7e-283 977.2 955 61.5
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 3.3e-282 975.3 960 59.3
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 9.6e-282 973.8 952 61.9
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 1.0e-278 963.8 941 59.9
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 1.4e-277 959.9 949 59.4
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 1.6e-276 956.4 951 59.8
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 1.6e-276 956.4 933 61.4
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.6e-276 956.4 966 59.1
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 4.6e-276 954.9 934 61.0
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 5.1e-275 951.4 967 58.5
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.9e-274 949.5 978 58.6
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 4.3e-274 948.3 896 63.8
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 2.4e-272 942.6 980 59.1
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 3.1e-272 942.2 946 60.7
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 3.1e-272 942.2 931 59.5
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 3.1e-272 942.2 965 59.9
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 9.0e-272 940.6 952 60.2
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.5e-271 939.9 972 56.9
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 1.5e-271 939.9 944 60.7
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 3.4e-271 938.7 984 57.9
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 3.4e-271 938.7 930 60.1
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 1.9e-269 932.9 925 60.4
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.5e-266 923.3 852 64.9
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 4.3e-266 921.8 981 58.9
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 2.6e-263 912.5 937 58.2
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 3.8e-262 908.7 1000 56.5
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 1.1e-261 907.1 959 56.9
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.6e-260 903.3 946 56.1
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.0e-259 900.6 945 57.2
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 3.0e-259 899.0 976 57.1
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.9e-259 898.7 951 58.9
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 6.7e-259 897.9 950 57.3
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 2.2e-257 892.9 951 56.3
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 1.8e-256 889.8 935 57.1
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 2.4e-256 889.4 951 57.1
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 2.4e-256 889.4 958 56.7
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 5.3e-256 888.3 974 56.8
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 7.0e-256 887.9 941 56.3
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 9.1e-256 887.5 951 56.2
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 9.1e-256 887.5 957 55.4
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 2.2e-254 882.9 948 59.1
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 2.2e-254 882.9 945 57.2
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 3.6e-252 875.5 943 56.0
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 4.7e-252 875.2 939 55.3
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 8.0e-252 874.4 944 55.4
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.0e-251 874.0 960 56.5
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 1.5e-250 870.2 959 56.7
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 9.7e-250 867.5 938 56.2
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 5.3e-248 861.7 1038 53.3
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 2.6e-247 859.4 941 55.7
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 2.9e-246 855.9 935 54.9
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 9.8e-242 840.9 824 61.4
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 1.2e-234 817.4 878 55.2
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 5.4e-232 808.5 974 51.6
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 1.4e-227 793.9 939 52.1
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 4.1e-208 729.2 939 50.5
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 2.5e-181 640.2 943 45.2
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 7.4e-181 638.6 963 44.4
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 1.4e-179 634.4 967 44.3
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 1.1e-173 614.8 447 69.8
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.5e-169 599.0 647 60.4
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 2.5e-165 587.0 705 53.5
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 4.6e-159 566.2 396 76.0
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 6.9e-155 552.4 581 55.9
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 1.7e-137 494.6 517 60.7
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.3e-133 480.3 630 49.8
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 9.1e-131 472.2 322 83.5
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 3.1e-123 447.2 919 38.6
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 3.5e-106 390.6 493 52.1
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 4.6e-90 337.0 269 68.8
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.3e-89 334.7 327 62.7
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 2.5e-88 331.3 625 39.4
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 9.2e-83 312.8 311 61.1
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 4.3e-72 277.3 261 56.3
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.1e-70 271.2 323 58.8
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 3.4e-69 267.7 405 47.7
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.7e-68 265.4 275 60.7
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.1e-63 248.4 263 52.1
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 5.8e-61 240.4 192 64.1
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 4.9e-60 237.3 968 27.3
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 1.4e-59 235.7 382 45.3
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 1.5e-48 199.1 1151 25.7
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 9.7e-32 143.3 83 84.3
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.8e-31 141.0 148 52.7
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 8.2e-31 140.2 129 60.5
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.1e-30 139.8 138 58.7
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 1.8e-30 139.0 345 37.7
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.8e-30 139.0 127 56.7
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 3.1e-30 138.3 329 37.4
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 5.3e-30 137.5 103 66.0
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 1.7e-28 132.5 693 24.4
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 1.4e-27 129.4 748 25.0
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 1.9e-27 129.0 119 59.7
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 1.6e-26 125.9 114 61.4
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 3.6e-26 124.8 250 39.6
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 2.8e-23 115.2 90 65.6
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 1.1e-22 113.2 90 65.6
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 5.0e-20 104.4 115 53.0
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 2.5e-19 102.1 72 76.4
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.1e-18 99.0 69 76.8
Dinv34035 Davidia involucrata HOM05D004844 ORTHO05D006036 1.8e-17 95.9 144 43.8
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.4e-16 91.3 52 82.7
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 7.5e-16 90.5 56 82.1
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 7.5e-16 90.5 83 63.9
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 1.8e-14 85.9 207 31.4
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.8e-14 85.9 98 51.0
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.4e-14 85.5 52 82.7
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 3.2e-11 75.1 54 72.2
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 1.8e-09 69.3 58 65.5
ATR0735G001 Amborella trichopoda HOM05D004844 ORTHO05D006036 4.0e-09 68.2 74 55.4
AagrBONN_evm.TU.Sc2ySwM_228.4285 Anthoceros agrestis HOM05D004844 ORTHO05D074214 1.2e-08 66.6 90 50.0
SEGI_23631 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 7.0e-06 57.4 47 66.0


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