Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.1e-161 572.4 301 100.0
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.8e-123 445.3 303 78.9
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.1e-113 412.9 305 73.4
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.7e-110 403.3 293 76.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.8e-104 383.3 303 69.0
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.7e-104 381.3 303 69.3
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 6.7e-104 381.3 303 68.6
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.1e-101 374.0 304 68.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.6e-97 360.1 189 96.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 8.0e-97 357.8 306 67.6
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 3.0e-96 355.9 302 66.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.1e-95 354.0 274 70.4
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.0e-95 353.2 310 64.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.7e-95 351.7 309 65.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 7.4e-95 351.3 309 65.7
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 7.4e-95 351.3 302 65.2
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.7e-94 349.0 302 65.2
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 3.7e-94 349.0 254 73.2
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 3.7e-94 349.0 297 66.7
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.1e-93 345.9 302 64.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.6e-92 343.6 307 65.1
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 2.6e-92 342.8 293 64.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.5e-92 342.4 250 71.6
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.2e-91 339.7 306 62.7
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.8e-91 339.0 349 58.7
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 8.5e-91 337.8 304 63.2
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.9e-90 336.7 312 62.2
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.5e-90 336.3 301 63.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 9.4e-90 334.3 262 68.7
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.1e-89 333.2 274 68.6
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.8e-88 330.1 264 70.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.3e-88 329.7 302 62.9
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.4e-87 325.5 308 61.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.7e-87 325.1 232 73.3
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.7e-87 325.1 216 76.9
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 8.2e-86 321.2 297 60.9
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.9e-84 315.1 258 68.2
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.7e-83 313.5 291 61.5
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.8e-83 312.4 215 73.5
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 8.5e-83 311.2 308 57.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.5e-82 310.5 307 59.3
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.5e-82 309.7 275 62.2
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.2e-82 309.3 309 58.9
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.2e-81 307.4 234 70.1
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.6e-81 307.0 241 66.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 4.0e-80 302.4 307 58.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 2.0e-79 300.1 207 72.9
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.4e-79 299.3 226 70.4
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.3e-78 297.4 301 58.1
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.8e-78 296.2 279 58.1
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.8e-78 296.2 300 58.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 3.7e-78 295.8 248 62.1
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.7e-78 295.8 266 59.4
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.8e-78 295.4 302 55.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 6.3e-78 295.0 241 64.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.3e-78 294.7 300 58.3
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 8.3e-78 294.7 244 63.5
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.1e-77 294.3 205 71.2
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.4e-77 293.9 301 56.1
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 2.4e-77 293.1 193 77.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 7.0e-77 291.6 237 64.6
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 1.6e-76 290.4 249 61.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.9e-76 288.5 300 58.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 5.0e-75 285.4 240 67.1
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.3e-74 282.7 213 68.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.3e-74 282.7 263 63.5
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.2e-74 282.3 263 63.1
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 9.5e-74 281.2 265 58.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.6e-73 280.4 213 65.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 4.7e-73 278.9 230 67.4
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 4.7e-73 278.9 215 65.6
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 4.7e-73 278.9 292 53.8
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 8.0e-73 278.1 212 65.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 3.0e-72 276.2 207 67.6
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.2e-71 274.2 351 51.6
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 5.7e-71 271.9 304 51.3
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 4.9e-70 268.9 175 77.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-68 264.2 290 56.2
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.0e-68 263.5 316 52.5
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.0e-68 263.5 254 58.3
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.5e-68 262.3 253 59.3
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 7.8e-68 261.5 290 55.9
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.9e-67 259.6 189 71.4
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.8e-67 259.2 211 60.2
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 3.8e-67 259.2 246 55.3
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 7.3e-66 255.0 389 47.0
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.2e-65 254.2 208 61.1
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 6.1e-65 251.9 211 59.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.5e-63 247.3 176 75.0
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.5e-63 247.3 203 63.5
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.1e-61 241.1 198 64.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 7.0e-61 238.4 231 58.4
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 3.5e-60 236.1 200 58.5
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 3.0e-59 233.0 274 51.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-58 231.1 277 51.6
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.3e-54 217.6 233 54.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.4e-53 213.4 205 60.0
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.2e-52 211.1 235 52.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.0e-51 206.5 178 63.5
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.1e-50 204.5 136 76.5
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.5e-50 203.4 222 55.4
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.1e-48 198.0 174 62.6
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 3.5e-44 183.0 237 43.0
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 9.5e-42 174.9 243 47.3
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.2e-41 172.2 143 58.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.8e-40 170.6 200 51.0
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.0e-40 169.5 111 73.9
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 9.9e-39 164.9 180 56.1
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.4e-38 161.8 233 46.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.6e-36 157.5 215 41.4
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.3e-35 154.5 179 55.3
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.9e-34 150.6 292 40.1
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.4e-32 144.4 116 62.1
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 2.0e-23 114.0 160 45.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 7.6e-23 112.1 178 36.0
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 4.2e-21 106.3 216 32.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 5.4e-21 105.9 193 35.2
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 7.4e-18 95.5 108 50.9
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 4.2e-13 79.7 69 59.4
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.1e-12 77.4 90 50.0
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 3.3e-10 70.1 53 62.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 8.2e-09 65.5 102 46.1


User provided reference genes

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