Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.5e-89 332.8 163 100.0
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 5.8e-78 294.3 214 72.4
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.5e-60 235.7 156 73.7
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 7.2e-60 234.2 161 72.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.0e-58 230.3 163 69.9
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.4e-58 229.9 151 74.8
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.4e-58 229.9 163 68.7
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 2.3e-58 229.2 161 67.7
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 2.3e-58 229.2 161 69.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.9e-58 228.4 150 74.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 1.1e-57 226.9 149 75.2
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.1e-57 226.9 158 72.8
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 5.7e-57 224.6 149 74.5
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.3e-56 223.4 157 71.3
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.7e-56 223.0 151 73.5
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.7e-56 223.0 160 71.2
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.7e-56 223.0 160 66.9
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 2.2e-56 222.6 151 73.5
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 3.7e-56 221.9 155 70.3
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 3.7e-56 221.9 160 67.5
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 8.2e-56 220.7 164 66.5
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.1e-55 220.3 161 68.3
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.4e-55 219.9 160 66.9
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.8e-55 219.5 155 69.7
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.4e-55 219.2 154 70.8
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.1e-55 218.8 159 64.8
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 7.0e-55 217.6 154 68.2
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 7.0e-55 217.6 155 69.0
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 9.1e-55 217.2 165 67.9
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 2.0e-54 216.1 161 65.2
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 3.5e-54 215.3 142 72.5
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 3.5e-54 215.3 164 63.4
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.3e-53 213.4 142 73.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.3e-53 213.4 154 68.2
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.7e-53 213.0 156 67.3
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.9e-53 212.2 155 67.1
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 8.5e-53 210.7 160 65.0
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.1e-52 210.3 152 69.7
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.9e-52 209.5 162 62.3
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 2.5e-52 209.1 164 62.8
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 4.2e-52 208.4 167 62.9
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 7.2e-52 207.6 146 70.5
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 7.2e-52 207.6 152 67.1
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 9.4e-52 207.2 145 71.0
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.2e-51 206.8 161 64.6
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 2.7e-51 205.7 163 63.2
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.7e-51 205.7 139 71.2
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 6.1e-51 204.5 152 65.8
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.8e-50 203.0 163 62.6
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 3.0e-50 202.2 147 62.6
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.0e-50 202.2 143 69.9
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 3.0e-50 202.2 157 63.1
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 5.2e-50 201.4 158 64.6
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 8.8e-50 200.7 147 63.3
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.1e-49 200.3 152 63.8
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.3e-49 198.7 148 63.5
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 4.4e-49 198.4 148 62.8
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 7.4e-49 197.6 148 62.8
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 9.7e-49 197.2 194 53.6
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.3e-48 196.8 148 62.8
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.2e-48 196.1 148 63.5
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.8e-48 195.7 141 70.2
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 8.2e-48 194.1 151 64.9
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.4e-47 193.4 139 66.9
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.4e-47 192.6 151 68.9
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 2.4e-47 192.6 148 60.8
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 5.3e-47 191.4 149 61.7
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 5.3e-47 191.4 157 60.5
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.6e-46 189.9 153 62.1
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.0e-45 187.2 140 62.1
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.7e-45 186.4 139 66.9
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 5.0e-45 184.9 153 59.5
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 6.5e-45 184.5 150 64.7
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 6.5e-45 184.5 159 58.5
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 7.2e-44 181.0 162 56.2
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 3.6e-43 178.7 157 60.5
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.6e-43 178.7 163 55.2
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 8.0e-43 177.6 141 61.7
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.8e-42 176.4 152 59.9
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 5.2e-42 174.9 150 60.0
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 6.8e-42 174.5 151 58.9
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.2e-40 169.5 143 59.4
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 4.1e-39 165.2 147 54.4
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 2.3e-34 149.4 131 55.0
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.6e-30 136.7 109 57.8
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.9e-29 132.5 168 45.8
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 4.0e-26 122.1 69 82.6
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 2.0e-25 119.8 142 43.0
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 2.8e-24 115.9 93 58.1
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 2.4e-23 112.8 137 40.9
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.1e-18 95.9 77 59.7
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 9.8e-17 90.9 96 49.0
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 4.9e-16 88.6 114 45.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 4.1e-15 85.5 114 44.7
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 3.9e-13 79.0 103 38.8
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.9e-12 76.6 59 57.6
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.3e-12 75.9 64 57.8
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 1.6e-06 57.0 69 46.4


User provided reference genes

Program Settings