Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008760 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.6e-213 745.7 365 100.0
Cfa009350 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.9e-44 184.1 400 38.8
Haze_12403 Corylus avellana HOM05D009398 ORTHO05D011511 1.0e-42 178.3 399 38.1
Haze_12398 Corylus avellana HOM05D009398 ORTHO05D011511 3.7e-40 169.9 371 38.3
Haze_12354 Corylus avellana HOM05D009398 ORTHO05D011511 1.6e-38 164.5 195 46.7
Cfa009419 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.1e-36 158.3 310 40.3
Cfa009360 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.5e-36 157.9 166 51.2
Haze_12078 Corylus avellana HOM05D009398 ORTHO05D011511 2.0e-33 147.5 225 40.9
Cfa009056 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.9e-29 133.3 180 45.6
Haze_12327 Corylus avellana HOM05D009398 ORTHO05D011511 4.3e-28 129.8 365 34.8
Haze_12353 Corylus avellana HOM05D009398 ORTHO05D011511 1.5e-25 121.3 399 32.6
Cfa009305 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.6e-25 120.6 341 35.5
Cfa005300 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.3e-20 103.6 131 42.0
Haze_12406 Corylus avellana HOM05D009398 ORTHO05D011511 3.6e-19 100.1 93 50.5
Cfa009423 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.8e-18 95.9 349 29.5
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 6.8e-18 95.9 176 35.8
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 6.8e-18 95.9 176 35.8
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 1.4e-15 88.2 194 33.0
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 5.4e-15 86.3 198 30.8
QL03p062579 Quercus lobata HOM05D037156 ORTHO05D011511 2.7e-14 84.0 202 31.2
Cfa009048 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.2e-11 72.8 280 31.1
Haze_06690 Corylus avellana HOM05D001139 ORTHO05D000936 8.1e-11 72.4 49 63.3
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 1.8e-10 71.2 162 34.6
Dinv16550 Davidia involucrata HOM05D000171 ORTHO05D000101 2.4e-10 70.9 160 31.9
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 6.8e-10 69.3 166 35.5
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 1.2e-09 68.6 166 33.1
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 1.2e-09 68.6 133 37.6
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 1.5e-09 68.2 162 33.3
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 7.6e-09 65.9 165 34.5
Dinv16552 Davidia involucrata HOM05D000171 ORTHO05D000101 1.3e-08 65.1 125 32.8
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 4.9e-08 63.2 165 33.3
Cfa009296 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.4e-08 62.8 285 32.3
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 6.4e-08 62.8 106 36.8
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 1.4e-07 61.6 122 33.6
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.4e-07 61.6 122 33.6
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 1.4e-07 61.6 158 31.0
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 1.9e-07 61.2 139 33.1
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.9e-07 61.2 104 33.7
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 3.2e-07 60.5 165 30.3
Gorai.001G219500 Gossypium raimondii HOM05D000007 ORTHO05D000521 5.4e-07 59.7 195 27.2
QL05p054335 Quercus lobata HOM05D000007 ORTHO05D003666 5.4e-07 59.7 166 27.7
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 9.3e-07 58.9 156 28.8
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 9.3e-07 58.9 156 28.8
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 9.3e-07 58.9 113 34.5
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 9.3e-07 58.9 131 32.8
Gohir.D07G196000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.1e-06 57.8 195 26.7
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 3.5e-06 57.0 153 30.7
Gohir.A07G175934 Gossypium hirsutum HOM05D000007 ORTHO05D000521 3.5e-06 57.0 202 27.7
vmacro01993 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 3.5e-06 57.0 126 31.0
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 4.6e-06 56.6 158 28.5
FAN07G2784 Fragaria x ananassa HOM05D021789 ORTHO05D009073 6.0e-06 56.2 138 32.6
Gohir.D07G173800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 6.0e-06 56.2 202 27.2
Gorai.001G194200 Gossypium raimondii HOM05D000007 ORTHO05D000521 6.0e-06 56.2 202 27.2


User provided reference genes

Program Settings