Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.8e-115 418.7 224 100.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 5.9e-105 384.4 224 86.6
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.9e-95 352.8 224 78.6
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 7.2e-95 350.9 218 79.8
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 7.2e-95 350.9 224 78.6
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 1.2e-94 350.1 219 84.5
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 4.7e-94 348.2 224 78.1
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 8.8e-93 344.0 224 76.3
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.2e-92 343.6 224 76.8
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 7.5e-92 340.9 230 75.2
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 7.5e-92 340.9 224 76.8
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.7e-91 339.7 224 77.7
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 2.2e-91 339.3 243 72.0
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 6.3e-91 337.8 224 75.4
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.1e-90 337.0 225 76.9
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.8e-90 336.3 219 74.9
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.1e-90 335.1 224 74.6
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 7.0e-90 334.3 224 75.0
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.6e-89 333.2 222 75.2
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.6e-89 333.2 224 75.4
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.5e-89 331.6 207 79.7
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 7.7e-89 330.9 223 74.9
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 7.7e-89 330.9 222 75.7
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.0e-88 330.5 222 74.3
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.0e-88 330.5 219 74.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.7e-88 329.7 214 75.2
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.3e-88 329.3 224 75.0
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.3e-88 329.3 215 77.7
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.3e-88 329.3 222 73.4
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.3e-88 329.3 221 75.1
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 3.8e-88 328.6 224 71.9
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.1e-87 327.0 222 72.5
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.5e-87 326.6 224 74.6
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.5e-87 326.6 225 74.7
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.9e-87 326.2 224 71.0
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.9e-87 326.2 217 77.4
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.3e-87 325.5 220 75.5
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 9.5e-87 323.9 224 75.4
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 9.5e-87 323.9 224 75.4
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 9.5e-87 323.9 219 73.5
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 9.5e-87 323.9 224 72.3
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.6e-86 323.2 217 72.8
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.6e-86 323.2 224 73.2
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 2.1e-86 322.8 224 73.2
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 2.8e-86 322.4 224 75.0
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 4.7e-86 321.6 214 73.8
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 6.1e-86 321.2 217 77.9
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 6.1e-86 321.2 224 75.9
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.3e-85 319.3 217 72.8
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 5.2e-85 318.2 224 72.3
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 6.8e-85 317.8 222 71.6
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 6.8e-85 317.8 218 73.4
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 8.9e-85 317.4 218 74.8
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.2e-84 317.0 221 71.5
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.5e-84 316.6 246 67.1
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 4.4e-84 315.1 216 73.6
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.2e-83 312.8 212 74.5
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 2.9e-83 312.4 224 70.5
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 3.7e-83 312.0 221 71.5
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 4.9e-83 311.6 260 68.5
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 6.4e-83 311.2 220 71.4
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.1e-82 310.5 222 77.9
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.1e-82 310.5 222 70.7
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 1.8e-82 309.7 224 70.1
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 2.4e-82 309.3 218 70.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 3.2e-82 308.9 221 74.2
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 7.0e-82 307.8 224 74.1
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.0e-81 306.2 222 72.5
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 3.5e-81 305.4 227 69.6
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 4.6e-81 305.1 224 68.3
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 4.6e-81 305.1 222 71.6
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.0e-80 303.9 228 70.6
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.3e-80 303.5 216 73.1
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 5.0e-80 301.6 216 73.1
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 4.3e-79 298.5 203 75.4
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.3e-79 298.5 223 69.1
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 9.5e-79 297.4 195 75.4
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 6.8e-77 291.2 260 65.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 9.8e-76 287.3 224 67.9
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.9e-75 285.8 211 70.6
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 3.7e-75 285.4 193 72.5
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 5.4e-74 281.6 224 62.9
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 7.0e-74 281.2 221 64.7
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 3.5e-73 278.9 186 76.3
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 7.8e-73 277.7 230 63.5
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 1.0e-72 277.3 208 74.5
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 1.0e-72 277.3 246 61.0
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.3e-72 276.9 178 75.8
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 3.9e-72 275.4 246 61.0
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 6.2e-70 268.1 219 63.0
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.4e-68 261.9 219 63.0
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.4e-66 256.9 220 62.3
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 9.2e-66 254.2 225 62.2
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.5e-65 252.3 223 62.3
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 9.5e-63 244.2 207 62.3
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.1e-61 239.2 273 56.8
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 3.5e-57 225.7 153 79.1
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.1e-53 214.2 154 68.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.4e-53 213.8 218 54.1
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 4.4e-52 208.8 208 56.2
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 3.8e-51 205.7 160 65.6
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.2e-49 200.7 214 50.9
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 3.6e-46 189.1 227 50.2
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 3.5e-41 172.6 313 38.7
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 4.6e-41 172.2 221 46.2
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 7.4e-39 164.9 201 51.2
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 9.6e-39 164.5 143 58.7
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.3e-35 154.1 105 82.9
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 7.1e-34 148.3 220 41.8
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 1.1e-31 141.0 85 85.9
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.6e-30 137.1 150 47.3
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 4.8e-30 135.6 384 31.0
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.7e-27 127.1 98 62.2
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 1.8e-24 117.1 70 80.0
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.5e-23 113.2 148 45.3
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 4.3e-23 112.5 134 48.5
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 3.7e-22 109.4 66 81.8
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 4.5e-20 102.4 51 96.1
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 2.2e-19 100.1 71 90.1
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 3.6e-17 92.8 66 74.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.5e-15 86.7 67 64.2
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 8.2e-14 81.6 56 73.2
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 6.9e-13 78.6 53 73.6
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.5e-12 77.4 199 33.2
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.5e-10 70.1 84 46.4
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.2e-10 68.6 57 59.6
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.8e-08 63.9 45 68.9


User provided reference genes

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