Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 2.2e-213 745.3 373 100.0
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 9.9e-190 666.8 426 81.5
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 5.3e-159 564.7 384 76.3
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 2.0e-150 536.2 378 75.7
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.9e-148 529.6 380 72.9
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.2e-148 528.9 378 72.5
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 9.4e-148 527.3 378 72.5
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.2e-147 526.9 380 71.6
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 6.1e-147 524.6 376 71.8
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.0e-146 523.9 382 71.5
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.4e-146 523.5 380 70.8
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.8e-146 523.1 382 71.5
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 3.0e-146 522.3 380 70.5
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 8.8e-146 520.8 291 86.3
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 9.7e-145 517.3 366 74.0
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.7e-144 516.5 376 71.0
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 3.7e-144 515.4 374 70.9
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 4.8e-144 515.0 357 73.1
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.3e-144 514.6 379 70.7
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 8.2e-144 514.2 358 74.6
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 8.2e-144 514.2 338 77.2
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.1e-143 513.8 335 77.0
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.1e-143 513.8 392 67.6
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.1e-143 513.8 385 69.1
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.8e-143 513.1 349 74.8
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.8e-143 513.1 379 70.7
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 2.4e-143 512.7 431 65.0
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.1e-143 512.3 308 80.2
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 3.1e-143 512.3 384 70.6
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 7.0e-143 511.1 380 70.8
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 7.0e-143 511.1 327 77.1
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.1e-143 510.8 379 70.2
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.1e-143 510.8 379 70.2
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 9.1e-143 510.8 383 68.9
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.2e-142 510.4 370 71.6
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 1.2e-142 510.4 382 67.0
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.5e-142 508.8 377 69.0
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 4.5e-142 508.4 386 68.7
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 4.5e-142 508.4 377 70.3
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 4.5e-142 508.4 330 76.4
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 7.7e-142 507.7 384 67.2
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 1.3e-141 506.9 374 68.2
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.7e-141 506.5 382 69.6
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 1.7e-141 506.5 373 68.4
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.7e-141 506.5 375 69.3
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 2.2e-141 506.1 379 69.7
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 3.8e-141 505.4 292 83.6
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 5.0e-141 505.0 379 68.9
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 6.5e-141 504.6 289 83.0
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 8.5e-141 504.2 308 81.2
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.9e-140 503.1 373 69.7
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.9e-140 503.1 374 69.3
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.9e-140 503.1 379 67.5
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 3.2e-140 502.3 338 74.3
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 5.5e-140 501.5 381 68.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 7.2e-140 501.1 357 72.0
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 9.4e-140 500.7 383 66.8
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.2e-139 500.4 364 70.9
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.2e-139 500.4 379 67.0
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 2.1e-139 499.6 290 82.1
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 2.7e-139 499.2 360 70.0
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 3.6e-139 498.8 377 67.9
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.1e-139 498.0 374 67.9
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 8.0e-139 497.7 374 68.4
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.4e-138 496.9 345 70.4
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.8e-138 496.5 332 75.6
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 4.0e-138 495.4 375 69.1
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 5.2e-138 495.0 325 72.9
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 6.7e-138 494.6 290 79.0
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 6.7e-138 494.6 364 68.4
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 6.7e-138 494.6 383 68.4
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.5e-137 493.4 303 76.9
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 2.0e-137 493.0 347 70.0
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 2.0e-137 493.0 339 72.3
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.6e-137 492.7 290 80.7
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 4.4e-137 491.9 373 67.0
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 5.7e-137 491.5 369 68.3
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 5.7e-137 491.5 373 67.0
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 5.7e-137 491.5 369 68.3
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 5.7e-137 491.5 290 81.0
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 5.7e-137 491.5 376 68.4
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 9.7e-137 490.7 378 68.5
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 1.7e-136 490.0 372 66.7
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.4e-135 486.9 377 67.1
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 1.8e-135 486.5 342 71.1
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 4.1e-135 485.3 359 69.1
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.2e-134 483.8 367 68.7
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 7.7e-134 481.1 345 68.1
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-133 479.9 427 61.8
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 2.2e-133 479.6 287 79.4
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 6.5e-133 478.0 373 66.5
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 2.7e-131 472.6 373 63.8
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 9.1e-127 457.6 373 64.3
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 1.9e-124 449.9 373 63.5
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 2.5e-124 449.5 389 61.4
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.8e-123 446.0 260 82.3
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 4.0e-122 442.2 325 65.5
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.4e-121 439.1 385 58.7
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 4.9e-120 435.3 292 69.9
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 7.0e-119 431.4 343 62.1
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.0e-118 429.9 342 66.7
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.7e-118 429.5 343 61.8
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.3e-117 426.4 290 68.3
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 5.0e-117 425.2 229 89.5
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.8e-115 419.5 292 67.1
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 1.5e-105 387.1 388 56.7
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 4.1e-95 352.4 308 62.7
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 1.0e-93 347.8 182 89.0
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 8.9e-90 334.7 338 52.4
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 4.0e-82 309.3 215 67.0
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.2e-81 307.8 274 61.7
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 3.4e-81 306.2 267 64.4
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 7.6e-81 305.1 268 61.9
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.3e-77 294.3 277 61.0
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 2.8e-75 286.6 271 58.7
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.4e-71 273.5 290 52.8
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 7.2e-47 192.2 242 47.9
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.8e-21 107.8 94 58.5
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 1.3e-16 91.7 148 43.2
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.7e-16 91.3 149 45.6
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.1e-15 88.6 63 63.5
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 4.1e-10 70.1 36 83.3


User provided reference genes

Program Settings