Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.8e-254 882.1 446 100.0
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 5.7e-192 674.5 469 78.3
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 4.4e-168 595.1 403 76.9
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.7e-165 585.9 403 73.2
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.0e-153 547.4 409 71.1
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.4e-151 538.1 399 69.7
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.0e-149 533.1 426 67.1
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.3e-148 530.4 415 67.7
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.0e-148 529.3 402 69.4
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 6.6e-148 528.1 405 68.6
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.9e-147 526.6 409 69.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 4.3e-147 525.4 409 67.5
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.2e-146 523.9 424 67.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-145 520.8 411 67.4
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.8e-145 520.0 411 68.9
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.8e-145 520.0 414 66.7
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.4e-144 515.8 477 59.7
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 8.3e-143 511.1 409 67.2
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 5.4e-142 508.4 409 66.5
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.7e-140 503.4 344 75.0
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-138 496.9 343 74.3
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 6.2e-138 495.0 323 74.0
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 8.1e-138 494.6 403 65.0
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.1e-137 494.2 407 63.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 8.9e-137 491.1 411 65.5
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.5e-136 490.3 376 67.6
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.5e-136 490.3 403 65.8
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 4.4e-136 488.8 411 65.0
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-135 487.3 403 65.0
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 1.1e-134 484.2 408 62.0
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.6e-133 480.3 407 61.7
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.0e-132 476.1 399 64.4
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 3.0e-132 476.1 311 73.0
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 8.6e-132 474.6 437 60.2
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.5e-131 473.0 436 60.3
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.3e-131 472.2 317 72.9
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.7e-130 468.8 296 75.3
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 8.1e-130 468.0 411 62.8
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.1e-130 468.0 419 58.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.1e-129 467.6 428 60.0
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.8e-129 466.8 379 65.7
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-129 466.5 420 58.8
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.4e-129 466.5 417 64.0
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 2.4e-129 466.5 312 73.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-129 466.5 305 74.8
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 4.0e-129 465.7 432 56.7
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.9e-129 464.5 406 61.8
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 8.9e-129 464.5 416 58.9
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.6e-128 463.0 413 61.0
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.4e-128 462.6 297 74.1
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.3e-127 460.7 290 79.7
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 8.4e-127 458.0 418 58.6
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.9e-126 456.8 302 73.8
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.9e-126 456.8 401 61.6
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.4e-126 456.4 297 73.1
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 9.2e-126 454.5 410 57.6
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 1.2e-125 454.1 374 64.4
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.6e-125 453.8 287 77.7
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.1e-125 453.4 357 62.7
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-125 453.0 344 69.8
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.6e-125 452.2 364 64.3
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.0e-124 451.1 355 64.5
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-123 446.4 295 75.6
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 3.3e-123 446.0 437 56.1
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 4.3e-123 445.7 418 58.1
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.3e-123 444.9 316 71.2
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.6e-122 443.7 473 54.1
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.6e-122 443.7 382 61.3
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.8e-122 443.0 304 73.4
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 3.6e-122 442.6 304 71.4
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 6.2e-122 441.8 311 73.0
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 8.1e-122 441.4 300 72.0
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.1e-121 441.0 392 59.9
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-121 441.0 316 71.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 2.4e-121 439.9 291 72.9
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.2e-120 437.6 285 73.0
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.2e-120 437.6 396 60.6
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 5.8e-120 435.3 312 68.9
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 2.9e-119 433.0 346 64.2
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.1e-118 431.0 412 58.5
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 7.1e-118 428.3 297 68.0
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 3.0e-116 422.9 304 66.4
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.5e-115 419.9 418 56.7
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 4.3e-115 419.1 265 78.1
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.2e-114 415.2 335 66.6
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.1e-114 414.8 335 66.3
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.1e-113 412.9 301 64.5
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.5e-112 410.6 269 72.5
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.1e-109 400.2 334 60.8
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 2.7e-109 399.8 534 47.9
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 7.9e-109 398.3 259 71.0
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.8e-108 397.1 294 63.3
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.6e-106 390.6 360 57.2
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.6e-104 381.7 244 72.5
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-102 377.5 294 66.7
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.6e-101 372.5 256 69.5
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.0e-83 313.9 302 57.3
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.0e-79 301.6 297 55.9
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-76 291.2 190 71.6
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 3.0e-76 290.0 444 45.3
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.7e-75 285.8 276 57.2
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 7.4e-75 285.4 351 47.9
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 2.2e-74 283.9 210 67.1
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 3.5e-72 276.6 282 47.5
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 8.5e-71 271.9 275 57.8
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-69 266.5 259 61.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.4e-68 264.6 256 55.1
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 4.0e-60 236.5 171 63.2
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 6.3e-58 229.2 188 57.4
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.9e-55 220.3 241 46.9
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 8.5e-55 218.8 306 41.5
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 9.4e-54 215.3 132 77.3
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.0e-48 197.6 203 53.2
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 4.0e-44 183.3 177 58.2
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.2e-40 171.8 179 50.3
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 2.0e-35 154.5 115 62.6
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 2.9e-34 150.6 146 49.3
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.9e-33 147.9 173 48.0
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.1e-28 132.1 209 44.5
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 1.8e-28 131.3 196 41.3
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 5.2e-28 129.8 78 84.6
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 1.6e-24 118.2 190 41.6
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.3e-23 114.4 305 28.2
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 3.0e-23 114.0 71 69.0
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 4.3e-22 110.2 131 46.6
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 4.0e-20 103.6 167 35.3
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.2e-19 102.1 301 26.2
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.5e-19 101.7 199 37.2
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.0e-19 101.3 179 38.0
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 7.6e-19 99.4 107 53.3
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 7.6e-19 99.4 72 69.4
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.1e-17 93.6 82 53.7
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.2e-16 92.0 98 53.1
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 4.6e-16 90.1 47 87.2
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 6.0e-16 89.7 272 25.4
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 7.8e-16 89.4 47 87.2
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.7e-15 88.2 272 25.7
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 8.6e-15 85.9 47 83.0
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 8.6e-15 85.9 58 69.0
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.3e-14 82.8 246 29.3
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 6.8e-12 76.3 55 65.5
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.2e-11 75.5 62 51.6
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 7.6e-11 72.8 303 24.8
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.7e-10 71.6 252 27.4
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 2.2e-10 71.2 258 25.6
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.3e-07 62.0 192 26.6


User provided reference genes

Program Settings