Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 9.7e-83 310.1 153 100.0
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 4.4e-67 258.1 131 96.9
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.1e-62 243.4 145 82.8
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.9e-62 242.7 143 83.2
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 9.7e-59 230.3 140 82.1
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.3e-55 219.9 145 74.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.2e-55 219.2 145 74.5
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.1e-54 216.9 128 79.7
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.2e-53 213.4 149 70.5
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.6e-53 213.0 135 76.3
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.1e-53 211.1 140 75.0
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 6.1e-53 211.1 142 71.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.0e-52 210.3 138 74.6
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.0e-52 210.3 143 73.4
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.8e-52 209.5 140 72.1
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.0e-52 208.8 140 73.6
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 4.0e-52 208.4 136 78.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 5.2e-52 208.0 140 73.6
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 8.8e-52 207.2 139 71.9
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 8.8e-52 207.2 150 70.0
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.0e-51 206.1 140 73.6
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.7e-51 204.5 136 75.7
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 5.7e-51 204.5 134 75.4
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 5.7e-51 204.5 140 72.1
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 7.5e-51 204.1 140 72.9
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.3e-50 203.4 146 67.8
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.8e-50 202.2 128 78.1
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 3.7e-50 201.8 128 77.3
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 6.3e-50 201.1 135 73.3
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 6.3e-50 201.1 144 69.4
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 8.3e-50 200.7 124 76.6
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.4e-49 199.1 135 71.9
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.1e-49 198.7 142 70.4
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 9.1e-49 197.2 142 66.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.2e-48 196.8 128 75.0
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.2e-48 196.8 139 72.7
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.6e-48 196.4 139 72.7
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.0e-48 196.1 136 70.6
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.7e-48 195.7 140 70.7
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 2.7e-48 195.7 145 66.2
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 2.7e-48 195.7 139 69.8
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.5e-48 194.9 139 72.7
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 4.5e-48 194.9 138 66.7
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 5.9e-48 194.5 129 69.8
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.3e-47 193.4 140 68.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.3e-47 193.4 142 68.3
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.2e-47 192.6 128 72.7
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.9e-47 192.2 129 69.0
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 3.8e-47 191.8 136 66.9
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 5.0e-47 191.4 136 67.6
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 3.2e-46 188.7 136 69.9
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.2e-46 188.3 136 65.4
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 5.5e-46 188.0 130 71.5
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 7.2e-46 187.6 139 64.0
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 9.4e-46 187.2 128 71.9
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 9.4e-46 187.2 150 66.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.2e-45 186.8 144 63.2
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.2e-45 186.8 136 67.6
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 2.1e-45 186.0 123 73.2
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.7e-45 184.9 129 67.4
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 2.3e-44 182.6 140 64.3
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.2e-43 180.3 138 65.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.0e-43 179.5 125 71.2
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 4.4e-43 178.3 125 67.2
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 3.7e-42 175.3 136 64.0
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 3.1e-41 172.2 137 62.0
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.0e-40 169.5 128 63.3
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.3e-39 166.0 128 63.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 8.6e-39 164.1 132 61.4
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.1e-38 163.7 123 65.0
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 2.5e-38 162.5 123 63.4
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.8e-36 156.4 97 77.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 4.0e-36 155.2 125 59.2
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.6e-35 152.5 144 56.2
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-34 150.2 121 57.9
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-34 150.2 121 57.9
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-34 150.2 121 57.9
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 1.4e-33 146.7 91 80.2
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.7e-31 139.8 118 60.2
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.9e-30 136.3 90 73.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 3.3e-30 135.6 128 53.1
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.6e-13 79.0 63 57.1


User provided reference genes

Program Settings