Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 8.3e-154 547.0 271 100.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 1.1e-113 413.7 241 88.0
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 6.2e-109 397.9 251 81.3
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.9e-106 388.3 251 79.3
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 3.3e-102 375.6 251 75.7
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 4.1e-100 368.6 251 74.5
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.1e-100 368.6 251 74.5
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.2e-99 367.1 251 74.1
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 2.6e-99 365.9 251 73.7
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 7.6e-99 364.4 251 73.3
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.0e-98 364.0 255 71.4
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.1e-97 360.5 251 73.3
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.4e-97 360.1 249 70.7
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.9e-97 359.8 252 71.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.2e-96 357.1 231 76.2
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.7e-96 355.9 279 67.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 2.7e-96 355.9 250 72.0
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 6.1e-96 354.8 242 76.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 6.1e-96 354.8 250 72.0
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.4e-95 353.6 229 76.0
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 1.4e-95 353.6 249 70.3
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.9e-94 349.7 251 72.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 2.5e-94 349.4 250 70.4
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 9.7e-94 347.4 250 70.0
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 3.7e-93 345.5 249 71.9
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 4.8e-93 345.1 230 74.8
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.1e-92 344.0 209 81.8
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.4e-92 343.6 243 72.4
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.8e-92 343.2 230 74.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 3.1e-92 342.4 248 69.8
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 5.3e-92 341.7 229 76.0
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 6.9e-92 341.3 206 80.6
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.2e-91 340.5 227 73.6
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.2e-91 340.5 249 67.9
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 1.5e-91 340.1 242 72.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.4e-91 339.0 249 67.5
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 4.5e-91 338.6 244 69.7
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.7e-90 336.7 205 81.0
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 2.2e-90 336.3 253 68.4
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 6.5e-90 334.7 273 62.6
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 8.5e-90 334.3 218 75.2
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 1.9e-89 333.2 230 72.2
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 4.2e-89 332.0 225 72.0
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 4.2e-89 332.0 205 77.6
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.7e-88 328.6 232 69.8
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 7.9e-88 327.8 250 65.6
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.0e-87 327.4 220 72.3
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.4e-87 327.0 213 74.6
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.3e-87 326.2 199 79.4
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 3.0e-87 325.9 228 71.9
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.0e-87 325.9 202 78.7
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 3.9e-87 325.5 241 68.0
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 5.1e-87 325.1 234 71.4
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 6.7e-87 324.7 228 71.1
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.5e-86 323.6 183 86.3
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.0e-86 323.2 201 78.1
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 3.3e-86 322.4 209 75.1
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.3e-86 322.4 222 72.5
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.4e-86 322.0 217 72.4
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 9.7e-86 320.9 202 78.2
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 9.7e-86 320.9 234 70.5
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 9.7e-86 320.9 249 67.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.3e-85 320.5 189 78.8
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 3.7e-85 318.9 258 62.4
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 8.2e-85 317.8 192 80.2
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.1e-84 317.4 203 77.3
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.4e-84 317.0 255 63.5
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.8e-84 316.6 226 69.9
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.4e-84 316.2 231 64.5
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 7.0e-84 314.7 209 72.7
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.9e-82 309.3 174 84.5
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.7e-80 302.8 225 65.8
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 2.3e-79 299.7 219 66.2
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.3e-77 293.9 284 57.4
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 5.3e-76 288.5 213 63.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.0e-75 286.6 194 70.1
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.6e-75 286.2 267 57.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 2.1e-72 276.6 251 60.2
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.0e-72 274.6 209 63.2
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.0e-72 274.6 209 63.2
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.3e-71 273.1 223 64.6
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 2.6e-70 269.6 225 60.4
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 6.3e-61 238.4 145 81.4
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 5.9e-59 231.9 247 54.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.6e-48 196.1 216 46.8
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 7.5e-46 188.3 209 48.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 2.1e-32 143.7 108 64.8
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.7e-19 100.1 71 63.4
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 6.6e-10 68.9 74 54.1
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 4.3e-09 66.2 93 52.7
MBI11_g02080_MAGBIO Magnolia biondii HOM05D049150 ORTHO05D048537 5.8e-06 55.8 28 85.7


User provided reference genes

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