Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 4.0e-151 538.1 281 100.0
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 6.9e-103 377.9 279 74.6
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.1e-92 344.0 293 65.2
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 2.7e-91 339.3 273 67.8
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.8e-90 336.7 288 63.9
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.5e-89 333.6 276 65.9
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.3e-88 330.5 291 63.2
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 8.2e-88 327.8 275 64.0
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 8.2e-88 327.8 297 61.3
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 5.3e-87 325.1 284 60.9
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.5e-86 322.4 275 63.3
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 7.7e-86 321.2 298 58.1
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 2.2e-85 319.7 286 61.2
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.5e-85 318.2 289 60.9
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.1e-84 317.4 232 66.8
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.2e-84 315.8 279 63.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 5.5e-84 315.1 289 59.5
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 5.5e-84 315.1 277 59.2
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 2.1e-83 313.2 272 61.8
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 3.6e-83 312.4 268 64.9
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.8e-82 310.1 274 59.5
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 3.0e-82 309.3 273 60.8
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 5.2e-82 308.5 273 60.8
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.7e-82 308.1 252 65.1
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.2e-81 307.4 277 58.1
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 4.4e-81 305.4 263 61.6
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 9.7e-81 304.3 277 57.8
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 9.7e-81 304.3 242 63.6
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 1.3e-80 303.9 276 60.5
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 4.8e-80 302.0 263 61.2
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.4e-79 300.4 292 58.6
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 1.8e-79 300.1 268 59.7
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.8e-79 300.1 265 60.4
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 3.1e-79 299.3 217 68.2
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 5.3e-79 298.5 266 56.4
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 7.0e-79 298.1 236 65.7
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 1.2e-78 297.4 216 65.3
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.6e-78 297.0 265 58.5
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 1.0e-77 294.3 266 56.0
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.0e-77 294.3 271 57.6
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 2.9e-77 292.7 268 58.6
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 3.8e-77 292.4 215 67.4
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 3.8e-77 292.4 218 66.5
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 6.5e-77 291.6 229 64.2
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 8.5e-77 291.2 274 57.7
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 1.1e-76 290.8 213 67.6
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 4.2e-76 288.9 273 56.8
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 4.2e-76 288.9 273 56.8
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 4.2e-76 288.9 261 59.4
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 5.5e-76 288.5 252 61.1
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 9.4e-76 287.7 260 57.3
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 2.1e-75 286.6 270 55.6
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 4.7e-75 285.4 277 56.7
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 6.1e-75 285.0 275 55.3
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.8e-74 283.5 240 60.4
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 1.8e-74 283.5 217 63.6
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.8e-74 283.5 257 58.8
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 2.3e-74 283.1 275 55.3
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 6.8e-74 281.6 274 58.0
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 6.8e-74 281.6 268 54.9
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 2.0e-73 280.0 259 56.8
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 2.0e-73 280.0 175 75.4
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 2.0e-73 280.0 257 58.8
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.0e-73 280.0 226 63.7
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.6e-73 279.6 274 55.1
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 3.4e-73 279.3 277 57.8
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 4.4e-73 278.9 271 55.0
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 5.7e-73 278.5 169 91.1
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 9.8e-73 277.7 274 54.7
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 3.7e-72 275.8 269 56.9
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 3.7e-72 275.8 273 53.8
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 3.7e-72 275.8 267 55.8
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 8.3e-72 274.6 208 66.8
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 8.3e-72 274.6 246 56.5
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 3.1e-71 272.7 267 53.2
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 7.7e-70 268.1 300 52.3
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.3e-69 267.3 257 58.8
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.7e-69 266.9 269 54.3
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 1.7e-69 266.9 214 62.6
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 3.8e-69 265.8 216 58.3
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.1e-68 264.2 234 62.0
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.9e-68 263.5 184 66.8
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.8e-67 259.6 256 56.2
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 1.8e-66 256.9 194 66.0
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 5.2e-66 255.4 188 64.9
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.5e-65 253.8 269 52.8
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 9.8e-65 251.1 238 61.8
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 9.8e-65 251.1 248 52.8
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.8e-64 249.6 189 65.6
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 3.7e-64 249.2 171 70.8
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 3.3e-60 236.1 256 56.6
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 1.4e-58 230.7 267 47.2
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 3.0e-58 229.6 273 49.1
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 3.0e-58 229.6 245 55.5
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 8.3e-56 221.5 232 53.9
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.2e-54 217.6 291 46.4
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.9e-53 212.6 266 47.4
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 4.7e-51 205.7 182 65.9
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.0e-50 202.6 198 52.5
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.0e-49 200.3 164 59.8
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 4.4e-49 199.1 243 44.9
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 5.8e-49 198.7 102 96.1
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 8.3e-48 194.9 183 63.9
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.5e-46 189.5 137 70.1
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 7.8e-46 188.3 244 46.7
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.0e-45 186.4 302 46.0
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.1e-43 180.3 329 42.9
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 3.6e-43 179.5 223 44.4
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 2.3e-42 176.8 93 89.2
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 4.0e-42 176.0 244 41.4
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 5.2e-42 175.6 93 89.2
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 1.3e-40 171.0 260 38.1
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.9e-36 157.1 173 45.1
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 7.3e-36 155.2 193 42.5
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.8e-35 153.3 121 61.2
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.3e-32 144.4 284 35.2
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 6.4e-32 142.1 192 46.4
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 6.0e-30 135.6 90 71.1
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 5.4e-23 112.5 259 33.6
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 6.0e-22 109.0 208 43.8
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 6.0e-22 109.0 171 42.7
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.4e-18 97.8 61 72.1
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 2.8e-11 73.6 208 36.5
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 2.0e-09 67.4 52 57.7
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 2.2e-08 63.9 51 58.8


User provided reference genes

Program Settings