Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008536 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.1e-95 353.2 171 100.0
Cfa010712 Carpinus fangiana HOM05D011273 ORTHO05D013289 8.0e-94 347.1 171 98.2
Cfa008487 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.7e-81 305.4 171 83.6
Cfa005445 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.2e-75 285.8 175 82.9
Cfa012649 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.1e-69 265.4 169 74.0
Cfa021206 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.8e-69 264.2 169 73.4
Cfa012336 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.1e-66 256.9 169 72.2
Cfa018419 Carpinus fangiana HOM05D011273 ORTHO05D013289 9.5e-63 243.8 169 69.2
Cfa019640 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.2e-53 211.5 169 61.5
Cfa010107 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.2e-38 161.4 169 48.5
Cfa022968 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.3e-37 158.3 169 47.3
Cfa002369 Carpinus fangiana HOM05D011273 ORTHO05D013289 4.4e-36 155.2 169 52.1
Cfa012337 Carpinus fangiana HOM05D011273 ORTHO05D013289 9.3e-26 120.9 66 87.9
Cfa002120 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.7e-22 109.0 118 45.8
Cfa005677 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.1e-14 83.2 94 45.7
Haze_20224 Corylus avellana HOM05D000484 ORTHO05D000346 5.5e-10 68.6 140 25.7
Hma1.2p1_0230F.1_g097240 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.3e-10 67.8 60 48.3
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 4.6e-09 65.5 84 40.5
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 6.1e-09 65.1 119 33.6
Cfa017746 Carpinus fangiana HOM05D014565 ORTHO05D013289 1.0e-08 64.3 104 33.7
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 3.0e-08 62.8 91 35.2
SGA_v2.0_scaffold22G09703 Striga asiatica HOM05D001383 ORTHO05D000309 3.9e-08 62.4 95 33.7
Cfa005717 Carpinus fangiana HOM05D014565 ORTHO05D124528 5.1e-08 62.0 104 33.7
Hma1.2p1_0012F.1_g007535 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.1e-08 62.0 60 45.0
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 6.7e-08 61.6 133 29.3
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-08 61.6 105 30.5
SGA_v2.0_scaffold167G38437 Striga asiatica HOM05D001383 ORTHO05D000309 8.7e-08 61.2 71 35.2
SGA_v2.0_scaffold472G52098 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-07 60.8 62 41.9
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.5e-07 60.5 138 32.6
SGA_v2.0_scaffold43G16251 Striga asiatica HOM05D001383 ORTHO05D000309 1.5e-07 60.5 101 30.7
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 1.9e-07 60.1 69 36.2
Hma1.2p1_0896F.1_g233840 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-07 60.1 80 38.8
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-07 60.1 60 45.0
Hma1.2p1_0257F.1_g103490 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-07 59.7 72 40.3
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 2.5e-07 59.7 62 40.3
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 2.5e-07 59.7 84 36.9
vmacro20400 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.5e-07 59.7 83 30.1
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-07 59.3 73 41.1
SGA_v2.0_scaffold157G37340 Striga asiatica HOM05D001383 ORTHO05D000309 3.3e-07 59.3 65 35.4
SGA_v2.0_scaffold5G03034 Striga asiatica HOM05D001383 ORTHO05D000309 3.3e-07 59.3 95 32.6
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 4.3e-07 58.9 149 27.5
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 4.3e-07 58.9 132 28.8
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.3e-07 58.9 112 33.0
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 4.3e-07 58.9 97 28.9
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 4.3e-07 58.9 97 28.9
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-07 58.9 91 35.2
arahy.Tifrunner.gnm1.ann1.DG6XDV Arachis hypogaea HOM05D029393 ORTHO05D000309 5.7e-07 58.5 151 26.5
arahy.Tifrunner.gnm1.ann1.QSEK4V Arachis hypogaea HOM05D029393 ORTHO05D000309 5.7e-07 58.5 151 26.5
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 5.7e-07 58.5 73 39.7
Medtr8g466420 Medicago truncatula HOM05D009039 ORTHO05D011159 5.7e-07 58.5 80 38.8
SGA_v2.0_scaffold14G07096 Striga asiatica HOM05D001383 ORTHO05D000309 5.7e-07 58.5 62 38.7
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 7.4e-07 58.2 139 31.7
QL11p007191 Quercus lobata HOM05D000005 ORTHO05D000012 7.4e-07 58.2 69 39.1
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.7e-07 57.8 62 40.3
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 9.7e-07 57.8 146 29.5
Hma1.2p1_0198F.1_g085550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.7e-07 57.8 89 32.6
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.7e-07 57.8 73 41.1
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.7e-07 57.8 103 34.0
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 9.7e-07 57.8 69 34.8
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-06 57.4 80 38.8
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-06 57.4 80 38.8
QL08p000859 Quercus lobata HOM05D022142 ORTHO05D000309 1.3e-06 57.4 83 36.1
VMungo0647G2310 Vigna mungo HOM05D008589 ORTHO05D010715 1.3e-06 57.4 119 31.9
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 1.6e-06 57.0 64 40.6
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-06 57.0 59 44.1
HanXRQChr02g0055571 Helianthus annuus HOM05D001383 ORTHO05D000309 1.6e-06 57.0 92 33.7
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 57.0 70 41.4
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 1.6e-06 57.0 71 33.8
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.6e-06 57.0 80 35.0
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 2.2e-06 56.6 61 39.3
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 2.2e-06 56.6 82 32.9
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.2e-06 56.6 56 41.1
SGA_v2.0_scaffold29G12301 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-06 56.6 95 31.6
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 2.8e-06 56.2 70 41.4
Hma1.2p1_1094F.1_g256460 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-06 56.2 82 34.1
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-06 56.2 72 36.1
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-06 56.2 100 34.0
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 3.7e-06 55.8 100 36.0
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.7e-06 55.8 58 43.1
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.7e-06 55.8 73 37.0
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.7e-06 55.8 73 37.0
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 4.8e-06 55.5 71 33.8
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.8e-06 55.5 71 35.2
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.8e-06 55.5 73 35.6
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 4.8e-06 55.5 83 34.9
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 6.3e-06 55.1 72 34.7
VMungo1215G1066 Vigna mungo HOM05D008573 ORTHO05D009911 6.3e-06 55.1 104 31.7
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 8.2e-06 54.7 67 35.8
EL10Ac9g22677 Beta vulgaris HOM05D008388 ORTHO05D000309 8.2e-06 54.7 136 27.2
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.2e-06 54.7 67 37.3
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.2e-06 54.7 72 40.3
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.2e-06 54.7 59 40.7
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.2e-06 54.7 59 40.7
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.2e-06 54.7 72 36.1
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 8.2e-06 54.7 66 39.4
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 8.2e-06 54.7 106 32.1
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 8.2e-06 54.7 66 34.8
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 8.2e-06 54.7 80 33.8
SGA_v2.0_scaffold45G17224 Striga asiatica HOM05D001383 ORTHO05D000309 8.2e-06 54.7 108 27.8


User provided reference genes

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