Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008445 Carpinus fangiana HOM05D000264 ORTHO05D000152 3.9e-70 268.1 143 100.0
Cfa021568 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.1e-32 143.7 145 57.2
Haze_11295 Corylus avellana HOM05D000264 ORTHO05D000152 6.8e-30 134.4 165 50.3
Cfa006697 Carpinus fangiana HOM05D000264 ORTHO05D000152 3.2e-19 99.0 151 41.7
Haze_18351 Corylus avellana HOM05D000264 ORTHO05D000152 6.6e-17 91.3 48 89.6
Haze_11286 Corylus avellana HOM05D000264 ORTHO05D000152 8.6e-17 90.9 150 40.7
Cfa008447 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.1e-16 90.5 142 40.8
Haze_11293 Corylus avellana HOM05D000264 ORTHO05D000152 3.6e-15 85.5 162 37.7
Haze_11291 Corylus avellana HOM05D000264 ORTHO05D000152 1.4e-14 83.6 58 70.7
Cfa008431 Carpinus fangiana HOM05D000264 ORTHO05D000152 3.1e-14 82.4 190 33.7
Haze_18349 Corylus avellana HOM05D000264 ORTHO05D000152 1.4e-11 73.6 148 35.1
QL10p054384 Quercus lobata HOM05D000264 ORTHO05D000152 5.4e-11 71.6 72 54.2
Cfa008435 Carpinus fangiana HOM05D000264 ORTHO05D000152 7.1e-11 71.2 45 77.8
Cfa008383 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.2e-10 70.5 207 30.0
QL10p053921 Quercus lobata HOM05D000477 ORTHO05D000338 1.2e-10 70.5 175 33.1
Thecc.04G245400 Theobroma cacao HOM05D000264 ORTHO05D000152 4.6e-10 68.6 69 50.7
Gorai.012G177700 Gossypium raimondii HOM05D000264 ORTHO05D000152 7.8e-10 67.8 80 42.5
Gorai.012G178500 Gossypium raimondii HOM05D000264 ORTHO05D000152 7.8e-10 67.8 80 42.5
CiPaw.01G190700 Carya illinoinensis HOM05D000264 ORTHO05D000152 1.0e-09 67.4 70 47.1
Gohir.D04G184525 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.7e-09 66.6 74 45.9
Gorai.012G178300 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.7e-09 66.6 74 45.9
Haze_11289 Corylus avellana HOM05D000264 ORTHO05D000152 2.3e-09 66.2 208 28.8
Gohir.D04G184801 Gossypium hirsutum HOM05D000264 ORTHO05D000152 2.3e-09 66.2 135 34.1
QL10p054050 Quercus lobata HOM05D000264 ORTHO05D000152 2.3e-09 66.2 71 53.5
CiPaw.01G049800 Carya illinoinensis HOM05D000264 ORTHO05D000152 3.0e-09 65.9 159 34.0
Gohir.D04G184550 Gossypium hirsutum HOM05D000264 ORTHO05D000152 3.0e-09 65.9 80 41.2
Gohir.D04G184250 Gossypium hirsutum HOM05D000264 ORTHO05D000152 3.9e-09 65.5 73 45.2
Gorai.012G179600 Gossypium raimondii HOM05D000264 ORTHO05D000152 3.9e-09 65.5 73 45.2
Gohir.D04G185250 Gossypium hirsutum HOM05D000264 ORTHO05D000152 5.1e-09 65.1 74 44.6
Gohir.D04G184200 Gossypium hirsutum HOM05D000264 ORTHO05D000152 6.6e-09 64.7 73 45.2
Gohir.D04G183800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 8.6e-09 64.3 73 45.2
Gorai.012G177600 Gossypium raimondii HOM05D000264 ORTHO05D000152 8.6e-09 64.3 74 44.6
Gorai.012G177500 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.1e-08 63.9 73 43.8
Thecc.04G245500 Theobroma cacao HOM05D000264 ORTHO05D000152 1.1e-08 63.9 69 47.8
Gohir.D04G184750 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.5e-08 63.5 74 43.2
Gorai.012G179000 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.5e-08 63.5 74 43.2
Gorai.012G176900 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.9e-08 63.2 73 43.8
Gorai.012G177800 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.9e-08 63.2 74 41.9
Gorai.012G177200 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.5e-08 62.8 74 43.2
Gorai.012G180100 Gossypium raimondii HOM05D000264 ORTHO05D000152 3.3e-08 62.4 74 43.2
Haze_11287 Corylus avellana HOM05D000264 ORTHO05D000152 4.3e-08 62.0 46 65.2
Gohir.D04G184400 Gossypium hirsutum HOM05D000264 ORTHO05D000152 4.3e-08 62.0 74 43.2
Gorai.012G177400 Gossypium raimondii HOM05D000264 ORTHO05D000152 4.3e-08 62.0 74 40.5
Gorai.012G178000 Gossypium raimondii HOM05D000264 ORTHO05D000152 4.3e-08 62.0 74 43.2
Gorai.012G179400 Gossypium raimondii HOM05D000264 ORTHO05D000152 4.3e-08 62.0 74 43.2
QL10p052455 Quercus lobata HOM05D000264 ORTHO05D000152 5.6e-08 61.6 71 47.9
Gohir.D04G184900 Gossypium hirsutum HOM05D000264 ORTHO05D000152 7.3e-08 61.2 74 43.2
Gorai.012G178100 Gossypium raimondii HOM05D000264 ORTHO05D000152 7.3e-08 61.2 149 31.5
arahy.Tifrunner.gnm1.ann1.98V0PV Arachis hypogaea HOM05D000992 ORTHO05D006704 9.5e-08 60.8 75 41.3
Cfa008384 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.2e-07 60.5 44 70.5
Ciclev10004657m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.2e-07 60.5 72 43.1
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.2e-07 60.5 71 42.3
Gohir.D04G184700 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.2e-07 60.5 159 28.3
Ciclev10004701m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.6e-07 60.1 71 42.3
Gohir.D04G184600 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.6e-07 60.1 74 41.9
Gorai.012G178700 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.6e-07 60.1 74 41.9
Lj6A647T16 Lonicera japonica HOM05D000264 ORTHO05D000152 1.6e-07 60.1 70 45.7
Gohir.D04G184300 Gossypium hirsutum HOM05D000264 ORTHO05D000152 2.1e-07 59.7 74 40.5
Gohir.D04G184575 Gossypium hirsutum HOM05D000264 ORTHO05D000152 2.1e-07 59.7 74 40.5
Gorai.012G176800 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.1e-07 59.7 74 39.2
Gorai.012G177900 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.1e-07 59.7 74 40.5
Gorai.012G178600 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.1e-07 59.7 74 40.5
Gorai.012G179800 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.1e-07 59.7 130 33.1
Atru.chr4.2238_Atru.chr4.2239 Acer truncatum HOM05D000264 ORTHO05D000152 3.6e-07 58.9 57 49.1
Gorai.012G179100 Gossypium raimondii HOM05D000264 ORTHO05D000152 3.6e-07 58.9 74 40.5
Gorai.012G180200 Gossypium raimondii HOM05D000264 ORTHO05D000152 3.6e-07 58.9 72 41.7
Gorai.012G178900 Gossypium raimondii HOM05D000264 ORTHO05D000152 4.7e-07 58.5 159 27.7
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 6.2e-07 58.2 70 45.7
Ciclev10006866m.g Citrus clementina HOM05D000264 ORTHO05D000152 6.2e-07 58.2 70 47.1
CANSAT25G3901 Cannabis sativa HOM05D000264 ORTHO05D000152 8.1e-07 57.8 77 42.9
Gohir.D04G184450 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.1e-06 57.4 75 40.0
Gohir.D04G184100 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.4e-06 57.0 73 39.7
Gohir.D04G185100 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.4e-06 57.0 91 38.5
Gohir.A04G140732 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.8e-06 56.6 73 41.1
Lj6P649T13 Lonicera japonica HOM05D000264 ORTHO05D000152 1.8e-06 56.6 71 46.5
Gohir.A04G140700 Gossypium hirsutum HOM05D000264 ORTHO05D000152 3.1e-06 55.8 73 39.7
Potri.019G108501 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.1e-06 55.8 57 49.1
QL10p054374 Quercus lobata HOM05D000264 ORTHO05D000152 3.1e-06 55.8 53 56.6
Duzib151G0964 Durio zibethinus HOM05D000264 ORTHO05D000152 4.0e-06 55.5 73 45.2
Ciclev10006527m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.2e-06 55.1 72 37.5
Ciclev10016608m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.2e-06 55.1 72 38.9
Dinv29921 Davidia involucrata HOM05D000264 ORTHO05D000152 5.2e-06 55.1 72 48.6
Gohir.D04G184851 Gossypium hirsutum HOM05D000264 ORTHO05D000152 5.2e-06 55.1 75 38.7
Gohir.D04G185200 Gossypium hirsutum HOM05D000264 ORTHO05D000152 5.2e-06 55.1 75 38.7
Gorai.012G179200 Gossypium raimondii HOM05D000264 ORTHO05D000152 5.2e-06 55.1 75 38.7
Gorai.012G180000 Gossypium raimondii HOM05D000264 ORTHO05D000152 5.2e-06 55.1 75 38.7
Ciclev10004698m.g Citrus clementina HOM05D000264 ORTHO05D000152 6.8e-06 54.7 72 37.5
Ciclev10006739m.g Citrus clementina HOM05D000264 ORTHO05D000152 6.8e-06 54.7 72 37.5
QL04p079867 Quercus lobata HOM05D000264 ORTHO05D000152 6.8e-06 54.7 55 52.7


User provided reference genes

Program Settings