Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.0e-63 246.5 122 100.0
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 9.8e-62 240.0 122 97.5
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 8.3e-53 210.3 120 83.3
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.4e-47 193.0 120 78.3
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 8.9e-47 190.3 120 75.8
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.2e-46 189.9 120 79.2
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.3e-45 186.4 122 79.5
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.7e-45 186.0 121 77.7
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.7e-45 184.9 121 71.9
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.9e-45 184.5 120 78.3
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.1e-44 183.3 120 75.8
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.9e-44 182.6 118 76.3
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.1e-44 181.4 119 72.3
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 7.1e-44 180.6 132 70.5
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 9.2e-44 180.3 121 72.7
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 9.2e-44 180.3 120 73.3
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.6e-43 179.5 120 75.0
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.6e-43 179.5 127 71.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.6e-43 179.5 122 73.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.6e-43 179.5 120 73.3
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.1e-43 179.1 120 75.0
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.7e-43 178.7 132 69.7
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.7e-43 178.7 121 73.6
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.5e-43 178.3 119 76.5
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 4.6e-43 177.9 121 74.4
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 6.0e-43 177.6 120 73.3
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 6.0e-43 177.6 120 74.2
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 6.0e-43 177.6 120 73.3
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.8e-43 177.2 120 74.2
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.0e-42 176.8 125 70.4
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.0e-42 176.8 124 70.2
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.7e-42 176.0 120 73.3
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.7e-42 176.0 121 72.7
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.7e-42 176.0 120 70.8
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.7e-42 176.0 122 73.8
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.3e-42 175.6 121 71.9
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 2.3e-42 175.6 120 69.2
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 3.0e-42 175.3 119 72.3
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 3.0e-42 175.3 120 69.2
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 3.0e-42 175.3 125 68.8
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 3.0e-42 175.3 120 73.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.9e-42 174.9 120 73.3
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 5.1e-42 174.5 120 71.7
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 5.1e-42 174.5 121 69.4
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 6.6e-42 174.1 120 73.3
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 8.6e-42 173.7 120 71.7
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 8.6e-42 173.7 122 73.0
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 8.6e-42 173.7 118 73.7
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.1e-41 173.3 121 69.4
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.1e-41 173.3 120 74.2
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.5e-41 172.9 120 72.5
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.5e-41 172.9 120 72.5
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.5e-41 172.9 120 73.3
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 2.5e-41 172.2 121 69.4
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 2.5e-41 172.2 119 69.7
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.6e-41 171.0 120 71.7
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 5.6e-41 171.0 120 70.8
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 7.3e-41 170.6 121 71.1
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 9.5e-41 170.2 120 71.7
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 9.5e-41 170.2 120 70.0
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 9.5e-41 170.2 120 65.8
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.2e-40 169.9 121 70.2
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.2e-40 169.9 121 72.7
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.2e-40 169.9 121 72.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.2e-40 169.9 121 74.4
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.6e-40 169.5 121 69.4
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.6e-40 169.5 120 72.5
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.1e-40 169.1 121 72.7
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.8e-40 168.7 120 67.5
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 4.7e-40 167.9 120 67.5
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.4e-39 166.4 120 70.0
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.8e-39 166.0 120 68.3
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 6.8e-39 164.1 120 68.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.0e-38 162.5 119 70.6
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.8e-38 161.0 148 58.8
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.3e-37 159.8 128 60.9
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.2e-37 159.1 120 70.0
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 2.2e-37 159.1 123 67.5
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.7e-37 158.3 128 69.5
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.9e-37 157.9 120 67.5
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.1e-36 156.8 120 67.5
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.4e-36 155.6 127 67.7
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 4.1e-36 154.8 129 59.7
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 5.4e-36 154.5 120 66.7
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.6e-35 152.9 120 61.7
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 8.6e-34 147.1 122 63.1
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.1e-33 146.7 121 63.6
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 1.1e-33 146.7 121 63.6
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.1e-33 146.7 121 64.5
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.5e-33 146.4 121 63.6
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.5e-33 145.6 121 63.6
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 4.3e-33 144.8 121 62.8
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 4.3e-33 144.8 121 63.6
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 5.6e-33 144.4 121 62.0
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.6e-32 142.9 121 62.8
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.6e-32 142.9 149 49.0
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 2.8e-32 142.1 121 62.0
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 3.6e-32 141.7 121 62.8
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 3.6e-32 141.7 121 62.8
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 5.2e-31 137.9 121 60.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.2e-30 136.7 127 56.7
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 9.3e-28 127.1 120 60.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 9.3e-28 127.1 126 54.8
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 3.9e-26 121.7 122 54.9
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.5e-25 119.8 73 78.1
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.6e-24 116.3 128 50.8
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 3.1e-23 112.1 126 49.2
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.3e-21 106.7 71 70.4
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 7.1e-20 100.9 57 78.9
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 3.5e-19 98.6 70 72.9
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.2e-14 83.6 50 74.0
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 4.5e-14 81.6 127 34.6
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 2.9e-13 79.0 115 40.9
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.9e-13 79.0 72 58.3
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 6.4e-13 77.8 108 44.4


User provided reference genes

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