Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 7.9e-109 397.1 200 100.0
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.4e-105 386.3 200 97.0
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 2.5e-94 349.0 197 88.8
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 5.1e-92 341.3 197 84.8
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 9.7e-91 337.0 198 81.3
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.3e-90 336.7 197 85.3
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 2.1e-90 335.9 200 80.5
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 2.8e-90 335.5 196 83.7
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.8e-89 332.8 194 83.5
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.8e-89 332.8 197 82.2
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 4.1e-89 331.6 199 82.9
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 6.9e-89 330.9 199 79.9
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.0e-89 330.5 198 83.3
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.0e-89 330.5 198 83.3
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 1.2e-88 330.1 198 81.8
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.2e-88 330.1 198 83.3
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.2e-88 330.1 197 83.8
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.5e-88 329.7 199 80.9
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 2.0e-88 329.3 200 81.5
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.5e-88 328.2 198 82.3
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 2.2e-87 325.9 200 81.0
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 8.5e-87 323.9 201 80.6
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.1e-86 323.6 199 77.9
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 2.5e-86 322.4 197 81.2
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 5.5e-86 321.2 198 81.3
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 1.6e-85 319.7 197 80.2
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 2.1e-85 319.3 198 78.8
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 4.6e-85 318.2 198 80.3
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 6.1e-85 317.8 197 81.2
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.0e-84 317.0 197 80.7
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.1e-83 313.5 198 80.3
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.1e-83 313.5 198 80.3
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 1.9e-83 312.8 198 80.3
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 2.5e-83 312.4 198 79.8
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 3.3e-83 312.0 198 77.3
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 5.7e-83 311.2 198 77.8
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.7e-83 310.5 198 79.8
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.3e-82 310.1 198 77.8
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 5.3e-81 304.7 202 75.7
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 3.4e-80 302.0 197 74.6
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 4.5e-80 301.6 200 74.0
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 7.7e-80 300.8 197 74.1
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.3e-79 300.1 200 77.0
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 5.0e-79 298.1 198 73.2
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 6.5e-79 297.7 194 74.7
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 5.5e-78 294.7 202 72.8
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 9.4e-78 293.9 201 73.1
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 9.4e-78 293.9 201 73.1
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 9.4e-78 293.9 201 73.1
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 6.1e-77 291.2 201 72.6
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 1.0e-76 290.4 197 74.6
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.4e-76 290.0 197 73.1
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 1.4e-76 290.0 201 71.1
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.4e-76 290.0 199 73.9
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 1.4e-76 290.0 197 75.1
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.0e-76 288.9 199 72.9
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 8.8e-76 287.3 194 73.7
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.5e-75 286.6 201 70.6
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 3.3e-75 285.4 200 73.5
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 5.7e-75 284.6 195 72.3
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.3e-74 283.5 200 74.0
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 6.3e-74 281.2 200 70.5
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 6.3e-74 281.2 206 69.9
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 2.0e-72 276.2 194 73.7
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 5.0e-71 271.6 198 70.2
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.4e-70 270.0 197 68.0
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 5.5e-70 268.1 200 67.0
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 7.2e-70 267.7 197 68.0
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.6e-69 266.5 197 68.0
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.6e-69 266.5 203 67.0
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 2.7e-69 265.8 200 65.0
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 2.7e-69 265.8 196 69.9
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 3.6e-69 265.4 199 69.3
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 4.7e-69 265.0 199 64.3
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 6.1e-69 264.6 196 69.4
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 7.9e-69 264.2 194 69.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.3e-68 262.7 185 71.4
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 3.0e-68 262.3 196 68.4
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.5e-67 260.0 196 65.3
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 7.4e-67 257.7 194 68.6
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 9.7e-67 257.3 201 66.7
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 2.2e-66 256.1 201 65.2
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 7.7e-64 247.7 194 67.0
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 1.7e-63 246.5 197 62.4
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.9e-63 245.7 198 65.7
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 8.5e-63 244.2 203 62.1
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.1e-62 243.8 200 63.5
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 2.5e-62 242.7 215 58.6
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 2.3e-60 236.1 203 59.6
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 5.2e-60 235.0 214 58.9
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.7e-60 234.6 182 65.9
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 7.7e-56 221.1 202 57.4
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.1e-54 217.2 145 75.9
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 4.2e-54 215.3 183 60.7
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 9.4e-54 214.2 185 60.5
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.1e-53 213.0 202 56.4
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 4.7e-53 211.8 196 57.7
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.5e-43 180.3 153 62.1
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.5e-43 180.3 156 61.5
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 5.7e-43 178.3 137 67.9
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 6.3e-42 174.9 197 50.8
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.7e-40 169.5 210 45.2
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 5.6e-38 161.8 170 54.1
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 2.1e-29 133.3 94 69.1
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 5.4e-25 118.6 86 65.1
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 3.6e-21 105.9 150 41.3
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 6.8e-20 101.7 60 88.3
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 4.1e-17 92.4 312 26.6
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 1.2e-16 90.9 66 66.7
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 2.7e-16 89.7 66 66.7
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 3.5e-16 89.4 201 37.8
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.7e-15 87.0 75 57.3
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 6.6e-15 85.1 47 83.0
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.3e-14 81.6 74 56.8
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.3e-14 81.6 74 56.8
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.3e-14 81.6 74 58.1
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.3e-14 81.6 74 56.8
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.6e-13 80.5 74 56.8
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 4.7e-13 79.0 74 55.4
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.2e-13 78.6 74 55.4
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 4.1e-09 65.9 50 68.0
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 4.1e-09 65.9 50 68.0
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 9.2e-09 64.7 104 43.3
A03p67130 Brassica napus HOM05D006363 ORTHO05D007920 4.3e-06 55.8 41 61.0
BraA01t02765Z Brassica rapa HOM05D006363 ORTHO05D007920 4.3e-06 55.8 41 61.0


User provided reference genes

Program Settings