Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 3.4e-104 381.7 200 100.0
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 7.2e-62 241.1 127 96.1
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.2e-55 219.5 127 87.4
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 3.0e-52 209.1 127 82.7
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.2e-51 207.2 127 82.7
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.4e-51 205.7 127 83.5
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.7e-50 203.4 127 81.9
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.7e-50 203.4 127 81.1
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.1e-49 200.7 127 80.3
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 2.0e-48 196.4 127 79.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 4.5e-48 195.3 127 78.7
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 6.5e-47 191.4 127 77.2
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 6.5e-47 191.4 127 77.2
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.3e-46 189.1 127 77.2
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 5.5e-46 188.3 127 76.4
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 5.5e-46 188.3 127 76.4
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 7.2e-46 188.0 128 77.3
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.2e-45 187.2 123 79.7
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 2.1e-45 186.4 123 79.7
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 2.8e-45 186.0 123 77.2
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 6.1e-45 184.9 127 73.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 6.1e-45 184.9 127 71.7
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.0e-44 184.1 127 79.5
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.0e-44 184.1 127 75.6
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.4e-44 183.7 119 79.8
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.8e-44 183.3 123 79.7
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 2.3e-44 183.0 127 73.2
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 3.0e-44 182.6 123 77.2
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 4.0e-44 182.2 129 70.5
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 6.8e-44 181.4 127 72.4
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.2e-43 180.6 127 78.7
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.5e-43 180.3 127 71.7
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.4e-43 179.1 127 73.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.4e-43 179.1 127 73.2
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 3.4e-43 179.1 127 78.7
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 4.4e-43 178.7 133 72.9
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 7.5e-43 177.9 127 75.6
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 7.5e-43 177.9 127 78.0
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 7.5e-43 177.9 127 73.2
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.3e-42 177.2 127 69.3
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.7e-42 176.8 132 70.5
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.2e-42 176.4 125 75.2
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.2e-42 176.4 130 72.3
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.7e-42 175.6 127 70.9
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.9e-42 175.3 127 71.7
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 4.9e-42 175.3 127 74.0
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 6.3e-42 174.9 127 68.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 6.3e-42 174.9 127 75.6
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.1e-41 174.1 128 70.3
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.1e-41 174.1 127 74.0
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.8e-41 173.3 127 74.0
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 3.1e-41 172.6 127 71.7
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 7.0e-41 171.4 127 71.7
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 9.2e-41 171.0 127 74.0
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.2e-40 170.6 97 87.6
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.2e-40 170.6 102 84.3
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.0e-40 169.9 127 73.2
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.7e-40 169.5 94 90.4
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.5e-40 168.7 127 66.1
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 5.9e-40 168.3 135 64.4
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 7.8e-40 167.9 128 70.3
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.0e-39 167.5 127 66.9
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 2.9e-39 166.0 106 74.5
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 2.9e-39 166.0 127 69.3
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.8e-39 165.6 127 67.7
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 3.8e-39 165.6 127 66.1
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 8.6e-39 164.5 127 67.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-38 164.1 128 68.0
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.5e-38 163.7 128 66.4
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.5e-38 162.9 128 67.2
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 2.5e-38 162.9 128 66.4
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 2.5e-38 162.9 132 65.9
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.5e-38 162.9 127 68.5
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 9.5e-38 161.0 95 84.2
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.2e-37 160.6 106 78.3
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.8e-37 159.5 127 66.1
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 6.1e-37 158.3 130 63.8
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.1e-37 158.3 90 87.8
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 1.0e-36 157.5 128 65.6
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.0e-36 155.6 112 72.3
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 5.2e-36 155.2 131 64.9
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.2e-35 154.1 127 66.9
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 3.4e-35 152.5 127 67.7
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 4.4e-35 152.1 83 91.6
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 7.5e-35 151.4 127 66.9
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 7.5e-35 151.4 129 65.1
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 7.5e-35 151.4 118 66.9
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 9.8e-35 151.0 130 64.6
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 9.8e-35 151.0 127 66.9
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.3e-34 150.6 88 83.0
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 2.2e-34 149.8 127 60.6
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 2.2e-34 149.8 126 65.1
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 2.2e-34 149.8 126 65.1
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.2e-34 149.8 88 85.2
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.9e-34 148.7 91 83.5
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.1e-33 147.5 127 64.6
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.4e-33 147.1 128 66.4
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 2.4e-33 146.4 128 64.1
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 9.2e-33 144.4 133 63.9
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 9.2e-33 144.4 131 63.4
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.2e-32 144.1 94 76.6
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.7e-32 142.9 88 79.5
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 6.8e-28 128.3 93 68.8
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.5e-24 115.9 105 58.1
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.0e-23 114.4 127 50.4
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.3e-23 114.0 90 63.3
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 5.0e-23 112.1 79 68.4
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.5e-22 110.5 115 53.9
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.8e-12 77.0 68 54.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 7.3e-06 55.1 91 38.5


User provided reference genes

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