Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.5e-62 242.7 120 100.0
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 5.1e-47 191.0 124 77.4
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 4.2e-41 171.4 150 66.7
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 5.7e-38 161.0 122 72.1
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 2.2e-37 159.1 130 70.0
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 8.2e-37 157.1 120 70.0
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 9.1e-36 153.7 118 72.0
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 1.2e-35 153.3 120 68.3
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 1.2e-35 153.3 94 84.0
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.5e-35 152.9 122 70.5
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 1.5e-35 152.9 121 69.4
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 2.6e-35 152.1 122 66.4
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 2.6e-35 152.1 104 71.2
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 1.0e-34 150.2 121 66.1
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.0e-34 150.2 118 67.8
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.0e-34 150.2 121 66.9
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 1.7e-34 149.4 122 67.2
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.2e-34 149.1 121 66.9
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 2.9e-34 148.7 124 67.7
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.8e-34 148.3 125 67.2
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.8e-34 148.3 118 66.9
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.5e-34 147.5 127 66.1
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 8.5e-34 147.1 121 73.6
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 1.1e-33 146.7 76 92.1
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.9e-33 146.0 120 65.8
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.9e-33 146.0 121 65.3
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 1.9e-33 146.0 99 73.7
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 2.5e-33 145.6 130 63.8
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 3.2e-33 145.2 125 64.0
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.2e-33 144.8 125 65.6
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 4.2e-33 144.8 119 65.5
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 5.5e-33 144.4 125 64.8
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 7.2e-33 144.1 122 66.4
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 7.2e-33 144.1 119 64.7
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 7.2e-33 144.1 120 65.8
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 7.2e-33 144.1 75 89.3
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 7.2e-33 144.1 75 89.3
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 7.2e-33 144.1 75 89.3
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.2e-32 143.3 73 91.8
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 1.6e-32 142.9 76 86.8
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 1.6e-32 142.9 115 67.8
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 1.6e-32 142.9 121 71.1
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.7e-32 142.1 126 61.9
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.6e-32 141.7 118 64.4
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 6.1e-32 141.0 125 63.2
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 8.0e-32 140.6 129 63.6
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.8e-31 139.4 121 64.5
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.8e-31 139.4 98 72.4
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.8e-31 139.4 121 64.5
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.2e-31 137.9 120 66.7
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 5.2e-31 137.9 101 72.3
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 5.2e-31 137.9 81 82.7
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 6.7e-31 137.5 78 85.9
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 6.7e-31 137.5 123 63.4
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 8.8e-31 137.1 120 63.3
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.1e-30 136.7 82 81.7
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.1e-30 136.7 82 81.7
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 2.0e-30 136.0 121 60.3
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.0e-30 136.0 76 82.9
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 3.3e-30 135.2 121 62.0
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 3.3e-30 135.2 95 70.5
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 4.4e-30 134.8 126 58.7
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 4.4e-30 134.8 78 83.3
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 4.4e-30 134.8 78 83.3
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 4.4e-30 134.8 78 83.3
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 5.7e-30 134.4 78 83.3
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 5.7e-30 134.4 78 83.3
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 5.7e-30 134.4 78 83.3
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 5.7e-30 134.4 87 78.2
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 5.7e-30 134.4 79 82.3
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 5.7e-30 134.4 78 82.1
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 7.4e-30 134.0 76 85.5
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 7.4e-30 134.0 76 82.9
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 9.7e-30 133.7 73 87.7
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.3e-29 133.3 129 58.9
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 1.3e-29 133.3 82 79.3
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.7e-29 132.9 76 84.2
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.7e-29 131.7 78 80.8
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 6.3e-29 131.0 73 82.2
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 8.2e-29 130.6 118 63.6
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 1.4e-28 129.8 74 85.1
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.4e-28 129.8 76 82.9
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 1.8e-28 129.4 120 61.7
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.8e-28 129.4 76 80.3
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 3.1e-28 128.6 73 83.6
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 4.1e-28 128.3 78 76.9
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 4.1e-28 128.3 83 78.3
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.2e-27 126.7 119 52.1
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 4.5e-27 124.8 118 54.2
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 4.5e-27 124.8 75 78.7
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 7.7e-27 124.0 71 81.7
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.3e-26 123.2 86 72.1
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.3e-26 123.2 74 79.7
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 5.0e-26 121.3 70 78.6
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.9e-25 119.4 80 73.8
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 4.2e-25 118.2 63 82.5
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.6e-24 116.3 110 56.4
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 5.2e-23 111.3 67 74.6
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 5.2e-23 111.3 67 74.6
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 9.7e-22 107.1 71 73.2
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 6.3e-21 104.4 78 62.8
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 3.1e-20 102.1 70 65.7
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 9.1e-20 100.5 88 58.0
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 4.5e-19 98.2 124 53.2
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 6.5e-18 94.4 93 62.4
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 2.2e-13 79.3 116 50.9
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 2.8e-13 79.0 68 50.0
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 3.1e-12 75.5 94 52.1
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 3.5e-11 72.0 85 50.6
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 6.1e-08 61.2 28 92.9
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 1.4e-07 60.1 86 47.7


User provided reference genes

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