Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 2.3e-85 318.9 172 100.0
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 2.6e-68 262.3 172 84.3
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.6e-65 253.1 172 77.9
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 1.2e-62 243.4 171 74.9
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.1e-50 203.8 172 64.0
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 1.9e-50 203.0 173 63.6
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 1.6e-49 199.9 173 63.0
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 2.1e-49 199.5 174 62.6
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 2.7e-49 199.1 173 61.3
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.3e-48 196.8 173 61.8
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.3e-48 196.8 173 62.4
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.3e-48 196.1 173 62.4
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 5.1e-48 194.9 173 61.8
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.3e-47 192.2 174 61.5
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 3.3e-47 192.2 175 64.0
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 4.3e-47 191.8 173 61.3
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 1.3e-46 190.3 172 58.7
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 1.6e-46 189.9 175 61.1
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 2.8e-46 189.1 173 61.3
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 3.1e-45 185.7 171 61.4
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 5.3e-45 184.9 173 57.8
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 9.0e-45 184.1 173 60.1
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 2.0e-44 183.0 175 59.4
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.0e-44 183.0 176 60.8
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 3.4e-44 182.2 176 59.7
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 3.4e-44 182.2 173 56.1
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 3.4e-44 182.2 173 59.5
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 5.8e-44 181.4 178 56.2
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 1.7e-43 179.9 164 63.4
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 4.9e-43 178.3 175 57.1
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.1e-41 172.9 183 56.8
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 1.0e-40 170.6 173 56.1
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 2.3e-40 169.5 173 56.6
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 1.5e-39 166.8 174 55.2
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.5e-39 166.8 147 62.6
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 2.5e-39 166.0 173 53.8
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 4.8e-38 161.8 174 54.6
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 4.8e-38 161.8 175 53.1
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 6.2e-38 161.4 175 52.6
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 52.0
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 3.1e-37 159.1 164 52.4
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 4.0e-37 158.7 173 54.9
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 4.0e-37 158.7 164 52.4
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 5.3e-37 158.3 175 52.0
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 5.3e-37 158.3 174 54.0
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.2e-36 157.1 173 52.0
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.2e-36 157.1 173 52.0
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 2.0e-36 156.4 175 49.7
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 2.0e-36 156.4 147 59.2
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 3.4e-36 155.6 175 52.0
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 1.0e-35 154.1 175 50.9
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.9e-35 152.5 179 56.4
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.8e-35 152.1 173 50.3
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 6.5e-35 151.4 174 50.6
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 1.6e-33 146.7 174 48.9
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 7.9e-33 144.4 174 50.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 1.3e-32 143.7 170 52.9
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.9e-31 139.8 171 47.4
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 3.3e-31 139.0 181 48.6
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 5.7e-31 138.3 176 50.0
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 5.7e-31 138.3 174 48.3
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 7.4e-31 137.9 125 64.8
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.3e-30 137.1 176 50.0
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.3e-30 137.1 176 50.0
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 1.3e-30 137.1 180 49.4
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 1.1e-29 134.0 181 46.4
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.4e-29 133.7 143 56.6
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.8e-29 133.3 125 56.8
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 4.1e-29 132.1 181 44.2
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 4.1e-29 132.1 173 47.4
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 4.1e-29 132.1 173 48.6
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 4.1e-29 132.1 180 45.6
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 1.2e-28 130.6 181 43.6
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 1.2e-28 130.6 178 46.1
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 2.6e-28 129.4 173 48.0
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.6e-28 129.4 169 43.8
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 4.5e-28 128.6 173 48.0
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 4.5e-28 128.6 180 44.4
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 5.9e-28 128.3 173 47.4
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 7.6e-28 127.9 173 48.0
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.2e-27 126.3 173 47.4
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 5.0e-27 125.2 127 55.9
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 8.5e-27 124.4 173 46.8
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 8.5e-27 124.4 155 50.3
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.1e-26 124.0 138 49.3
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 7.2e-26 121.3 174 45.4
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.2e-25 120.6 181 42.5
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 2.7e-25 119.4 181 41.4
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 4.6e-25 118.6 182 40.7
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 6.1e-25 118.2 174 44.3
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 6.1e-25 118.2 176 44.9
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 6.1e-25 118.2 176 44.9
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 7.9e-25 117.9 127 49.6
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 1.0e-24 117.5 174 44.8
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 1.0e-24 117.5 174 44.8
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 1.0e-24 117.5 174 44.8
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 3.3e-23 112.5 121 52.1
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 1.3e-22 110.5 204 41.7
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 1.1e-21 107.5 170 39.4
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 4.1e-21 105.5 129 49.6
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 4.1e-21 105.5 107 55.1
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 9.1e-21 104.4 145 44.8
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 4.5e-20 102.1 172 38.4
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 8.5e-19 97.8 118 47.5
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 5.5e-18 95.1 73 64.4
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 2.7e-17 92.8 163 39.3
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 4.7e-17 92.0 100 52.0
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 6.1e-17 91.7 164 39.0
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 8.8e-16 87.8 174 31.6
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 4.4e-15 85.5 172 33.7
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 2.4e-13 79.7 158 33.5
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 4.1e-13 79.0 49 85.7
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 2.2e-11 73.2 171 29.8
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.9e-10 70.1 125 32.8
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 5.5e-10 68.6 195 30.8
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 9.4e-10 67.8 87 48.3
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 1.2e-09 67.4 144 35.4
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 3.9e-08 62.4 60 51.7
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 2.2e-06 56.6 174 31.0


User provided reference genes

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