Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008178 Carpinus fangiana HOM05D008678 ORTHO05D010561 9.0e-119 430.3 216 100.0
Haze_13871 Corylus avellana HOM05D008678 ORTHO05D010561 7.2e-84 314.3 220 80.0
Haze_19041 Corylus avellana HOM05D008678 ORTHO05D010561 2.7e-62 242.7 220 61.4
Cfa020725 Carpinus fangiana HOM05D008678 ORTHO05D010561 4.3e-60 235.3 224 61.2
CiPaw.03G094000 Carya illinoinensis HOM05D008678 ORTHO05D010561 6.4e-48 194.9 240 54.2
QL09p019622 Quercus lobata HOM05D008678 ORTHO05D010561 4.8e-35 152.1 224 48.7
Gohir.A12G198800 Gossypium hirsutum HOM05D008678 ORTHO05D010561 1.4e-34 150.6 229 41.9
COL.COLO4_14128 Corchorus olitorius HOM05D008678 ORTHO05D010561 2.4e-34 149.8 240 42.9
Gohir.D12G201500 Gossypium hirsutum HOM05D008678 ORTHO05D010561 5.3e-34 148.7 229 41.5
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 9.0e-34 147.9 179 49.7
Gorai.008G216600 Gossypium raimondii HOM05D008678 ORTHO05D010561 1.3e-32 144.1 229 41.0
Thecc.03G156400 Theobroma cacao HOM05D008678 ORTHO05D010561 2.2e-32 143.3 239 41.0
Nitab4.5_0003875g0050 Nicotiana tabacum HOM05D008678 ORTHO05D010561 1.4e-31 140.6 232 40.5
Nitab4.5_0001383g0020 Nicotiana tabacum HOM05D008678 ORTHO05D010561 1.2e-30 137.5 221 40.3
Rhsim03G0168000 Rhododendron simsii HOM05D008678 ORTHO05D010561 1.0e-29 134.4 246 41.1
Ciclev10006531m.g Citrus clementina HOM05D008678 ORTHO05D010561 3.0e-29 132.9 219 42.0
Glyma.12G005500 Glycine max HOM05D008678 ORTHO05D010561 3.0e-29 132.9 261 37.2
Nn6g34019 Nelumbo nucifera HOM05D008678 ORTHO05D010561 3.9e-29 132.5 219 40.2
RhsimUnG0046600 Rhododendron simsii HOM05D008678 ORTHO05D010561 3.9e-29 132.5 235 42.1
Aqoxy5G00775 Aquilegia oxysepala HOM05D008678 ORTHO05D010561 1.5e-28 130.6 113 57.5
Actinidia25006 Actinidia chinensis HOM05D008678 ORTHO05D010561 2.5e-28 129.8 212 43.4
Cc02_g04210 Coffea canephora HOM05D008678 ORTHO05D010561 3.3e-28 129.4 222 41.4
Hma1.2p1_1640F.1_g295075 Hydrangea macrophylla HOM05D008678 ORTHO05D010561 3.6e-27 125.9 219 41.1
Hma1.2p1_1640F.1_g295090 Hydrangea macrophylla HOM05D008678 ORTHO05D010561 3.6e-27 125.9 219 41.1
PGSC0003DMG400013859 Solanum tuberosum HOM05D008678 ORTHO05D010561 3.6e-27 125.9 216 38.0
vmacro06794 Vaccinium macrocarpon HOM05D008678 ORTHO05D010561 6.2e-27 125.2 225 40.4
Sed0024942 Sechium edule HOM05D008678 ORTHO05D010561 1.1e-26 124.4 218 40.4
Solyc03g083980.1 Solanum lycopersicum HOM05D008678 ORTHO05D010561 5.8e-25 118.6 216 37.5
Manes.14G035600 Manihot esculenta HOM05D008678 ORTHO05D010561 7.6e-25 118.2 207 39.1
Oeu015316.1 Olea europaea HOM05D008678 ORTHO05D010561 4.9e-24 115.5 201 40.3
Nn1g01065 Nelumbo nucifera HOM05D008678 ORTHO05D010561 8.4e-24 114.8 112 54.5
Cpa.g.sc3.317 Carica papaya HOM05D008678 ORTHO05D010561 5.5e-23 112.1 115 50.4
Sed0022973 Sechium edule HOM05D008678 ORTHO05D010561 2.7e-22 109.8 218 36.2
MELO3C021628.2 Cucumis melo HOM05D008678 ORTHO05D010561 1.0e-21 107.8 220 40.0
Peaxi162Scf00241g00033 Petunia axillaris HOM05D008678 ORTHO05D010561 6.7e-21 105.1 228 36.8
Oeu037645.1 Olea europaea HOM05D008678 ORTHO05D010561 3.3e-20 102.8 192 39.1
Prupe.2G277600 Prunus persica HOM05D008678 ORTHO05D010561 3.7e-19 99.4 247 34.0
TPR.G137 Trifolium pratense HOM05D016164 ORTHO05D010561 3.7e-19 99.4 218 34.9
VMungo1127G0666 Vigna mungo HOM05D016164 ORTHO05D010561 5.3e-18 95.5 249 33.7
arahy.Tifrunner.gnm1.ann1.BE0B4V Arachis hypogaea HOM05D008678 ORTHO05D010561 1.5e-17 94.0 222 35.1
MD07G1254300 Malus domestica HOM05D008678 ORTHO05D010561 1.5e-17 94.0 227 35.2
Phvul.011G006300 Phaseolus vulgaris HOM05D016164 ORTHO05D010561 2.0e-17 93.6 245 31.8
Psat7g193840 Pisum sativum HOM05D016164 ORTHO05D010561 1.3e-16 90.9 211 33.6
Medtr6g016290 Medicago truncatula HOM05D016164 ORTHO05D010561 8.4e-16 88.2 244 33.6
Lj3g0007730 Lotus japonicus HOM05D016164 ORTHO05D010561 2.7e-14 83.2 258 30.6
Medtr4g036225 Medicago truncatula HOM05D016164 ORTHO05D010561 3.5e-14 82.8 211 34.6
CsaV3_5G026690 Cucumis sativus L. HOM05D008678 ORTHO05D010561 1.0e-13 81.3 211 33.6
Glyma.09G231050 Glycine max HOM05D008678 ORTHO05D010561 1.0e-13 81.3 95 48.4
Sabra15G0140100 Salix brachista HOM05D008678 ORTHO05D010561 1.3e-13 80.9 237 33.3
FvH4_7g27590 Fragaria vesca HOM05D020624 ORTHO05D010561 8.7e-13 78.2 177 35.6
Ca_25002_v3 Cicer arietinum L. HOM05D016164 ORTHO05D010561 4.3e-12 75.9 214 32.2
Potri.015G126700 Populus trichocarpa HOM05D008678 ORTHO05D010561 7.4e-12 75.1 119 42.9
SGA_v2.0_scaffold543G52824 Striga asiatica HOM05D025744 ORTHO05D030685 5.9e-09 65.5 94 41.5
FAN03G2785 Fragaria x ananassa HOM05D020624 ORTHO05D010561 2.9e-08 63.2 176 30.7
FAN06G4104 Fragaria x ananassa HOM05D020624 ORTHO05D010561 6.5e-08 62.0 176 30.7
FAN10G0763 Fragaria x ananassa HOM05D020624 ORTHO05D010561 1.1e-07 61.2 175 30.3
FAN06G3750 Fragaria x ananassa HOM05D020624 ORTHO05D010561 4.2e-07 59.3 77 41.6


User provided reference genes

Program Settings