Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007996 Carpinus fangiana HOM05D002873 ORTHO05D002978 9.9e-72 273.5 151 100.0
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 1.0e-12 77.4 68 63.2
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 5.2e-12 75.1 68 61.8
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 5.2e-12 75.1 68 61.8
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 5.2e-12 75.1 68 61.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-11 73.6 68 60.3
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.5e-11 73.6 68 63.2
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 2.6e-11 72.8 68 60.3
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 4.4e-11 72.0 68 58.8
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 1.7e-10 70.1 66 60.6
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.1e-09 65.9 68 64.7
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.1e-09 65.9 68 52.9
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.0e-09 64.7 65 63.1
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 9.1e-09 64.3 68 51.5
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 1.2e-08 63.9 67 52.2
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 1.6e-08 63.5 66 78.8
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 1.6e-08 63.5 68 70.6
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.7e-08 62.8 68 61.8
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.7e-08 62.8 68 61.8
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.7e-08 62.8 84 51.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 4.5e-08 62.0 68 58.8
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.9e-08 61.6 66 62.1
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 5.9e-08 61.6 68 63.2
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 7.7e-08 61.2 66 48.5
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 7.7e-08 61.2 68 64.7
Prupe.3G243400 Prunus persica HOM05D029644 ORTHO05D030068 1.0e-07 60.8 63 77.8
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 1.0e-07 60.8 66 59.1
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.0e-07 60.8 66 59.1
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.3e-07 60.5 68 54.4
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 1.3e-07 60.5 68 52.9
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.7e-07 60.1 66 71.2
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.7e-07 60.1 66 71.2
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 1.7e-07 60.1 66 50.0
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.2e-07 59.7 66 62.1
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.9e-07 59.3 68 60.3
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 3.8e-07 58.9 66 63.6
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 3.8e-07 58.9 68 45.6
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 3.8e-07 58.9 68 45.6
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 3.8e-07 58.9 70 50.0
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 3.8e-07 58.9 83 43.4
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 5.0e-07 58.5 64 50.0
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 5.0e-07 58.5 64 50.0
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 6.5e-07 58.2 68 64.7
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 6.5e-07 58.2 66 62.1
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 6.5e-07 58.2 68 60.3
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 6.5e-07 58.2 68 51.5
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 6.5e-07 58.2 66 48.5
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 8.5e-07 57.8 67 58.2
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 8.5e-07 57.8 67 58.2
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 8.5e-07 57.8 67 58.2
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 8.5e-07 57.8 68 54.4
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 8.5e-07 57.8 63 49.2
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.1e-06 57.4 68 44.1
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.1e-06 57.4 68 44.1
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.1e-06 57.4 68 44.1
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.1e-06 57.4 68 57.4
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.1e-06 57.4 68 55.9
Duzib268G0192 Durio zibethinus HOM05D002873 ORTHO05D002978 1.1e-06 57.4 66 74.2
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 1.1e-06 57.4 66 72.7
CiPaw.04G005400 Carya illinoinensis HOM05D002873 ORTHO05D002978 1.5e-06 57.0 68 73.5
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.5e-06 57.0 66 75.8
PSO017G1587 Papaver somniferum HOM05D002873 ORTHO05D002978 1.5e-06 57.0 68 64.7
PSO017G6817 Papaver somniferum HOM05D002873 ORTHO05D002978 1.5e-06 57.0 68 64.7
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 1.5e-06 57.0 68 63.2
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.9e-06 56.6 66 71.2
CARHR076460 Cardamine hirsuta HOM05D002873 ORTHO05D002978 1.9e-06 56.6 67 59.7
CiPaw.04G005500 Carya illinoinensis HOM05D002873 ORTHO05D002978 1.9e-06 56.6 68 72.1
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.9e-06 56.6 62 50.0
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 1.9e-06 56.6 68 58.8
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 2.5e-06 56.2 67 55.2
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 2.5e-06 56.2 67 55.2
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 2.5e-06 56.2 61 52.5
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-06 56.2 42 69.0
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.5e-06 56.2 66 72.7
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 2.5e-06 56.2 60 50.0
FvH4_6g45800 Fragaria vesca HOM05D002873 ORTHO05D002978 3.2e-06 55.8 38 73.7
FAN09G4276 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.2e-06 55.8 38 73.7
PSO478G1110 Papaver somniferum HOM05D002873 ORTHO05D002978 3.2e-06 55.8 68 61.8
MELO3C022081.2 Cucumis melo HOM05D002873 ORTHO05D002978 4.2e-06 55.5 37 81.1
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 4.2e-06 55.5 62 62.9
Duzib138G1180 Durio zibethinus HOM05D002873 ORTHO05D002978 4.2e-06 55.5 81 63.0
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 5.5e-06 55.1 66 54.5
FvH4_6g45802 Fragaria vesca HOM05D002873 ORTHO05D002978 5.5e-06 55.1 68 73.5
FAN05G0873 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.5e-06 55.1 68 73.5
Lj1g0022638 Lotus japonicus HOM05D002873 ORTHO05D002978 5.5e-06 55.1 62 67.7
Sed0026500 Sechium edule HOM05D002873 ORTHO05D002978 5.5e-06 55.1 68 73.5
THA.LOC109116670 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 5.5e-06 55.1 40 67.5
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 7.2e-06 54.7 69 50.7
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 7.2e-06 54.7 66 47.0
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.2e-06 54.7 66 57.6
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 9.4e-06 54.3 66 71.2
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 9.4e-06 54.3 66 71.2
Sc10g0001460 Simmondsia chinensis HOM05D002873 ORTHO05D002978 9.4e-06 54.3 37 70.3


User provided reference genes

Program Settings