Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007988 Carpinus fangiana HOM05D002873 ORTHO05D002978 3.4e-27 124.8 90 100.0
Haze_14086 Corylus avellana HOM05D002873 ORTHO05D002978 6.8e-20 100.5 88 85.2
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.9e-17 92.4 90 63.3
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 5.1e-15 84.3 90 58.9
Psat3g191840 Pisum sativum HOM05D002873 ORTHO05D002978 7.1e-09 63.9 83 47.0
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 2.1e-08 62.4 89 42.7
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.1e-08 62.4 89 46.1
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 4.6e-08 61.2 90 50.0
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.3e-07 59.7 83 45.8
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 2.3e-07 58.9 89 43.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.3e-07 58.9 89 42.7
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.3e-07 58.9 89 42.7
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 3.9e-07 58.2 89 42.7
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 3.9e-07 58.2 90 42.2
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 5.1e-07 57.8 89 42.7
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 5.1e-07 57.8 89 42.7
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 5.1e-07 57.8 89 41.6
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 5.1e-07 57.8 89 43.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 6.6e-07 57.4 89 41.6
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 8.7e-07 57.0 89 44.9
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 1.1e-06 56.6 89 42.7
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 41.6
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 42.7
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 42.7
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 41.6
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 42.7
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 41.6
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 1.5e-06 56.2 89 42.7
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 1.5e-06 56.2 86 43.0
Medtr7g020780 Medicago truncatula HOM05D002873 ORTHO05D002978 1.5e-06 56.2 90 45.6
TAR374G1020 Trochodendron aralioides HOM05D061650 ORTHO05D002978 1.5e-06 56.2 43 65.1
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.9e-06 55.8 89 40.4
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 1.9e-06 55.8 90 40.0
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 2.5e-06 55.5 90 40.0
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.5e-06 55.5 90 41.1
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 2.5e-06 55.5 89 40.4
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.3e-06 55.1 92 44.6
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 4.3e-06 54.7 89 41.6
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 4.3e-06 54.7 89 41.6
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 4.3e-06 54.7 89 41.6
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 4.3e-06 54.7 89 40.4
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 4.3e-06 54.7 90 41.1
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 7.3e-06 53.9 85 40.0
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 9.6e-06 53.5 89 41.6


User provided reference genes

Program Settings