Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 9.2e-279 963.0 510 100.0
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 3.5e-254 881.3 502 92.6
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 2.8e-158 562.8 569 59.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 2.6e-140 503.1 479 60.5
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 3.5e-137 492.7 469 60.1
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 4.6e-137 492.3 479 61.6
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 8.4e-131 471.5 477 57.2
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 2.3e-128 463.4 484 56.8
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 3.0e-128 463.0 485 57.3
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 3.0e-128 463.0 504 55.4
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.3e-127 459.5 484 56.8
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 4.0e-125 452.6 469 55.0
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.7e-123 447.2 435 58.6
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.9e-123 446.4 469 54.4
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 9.6e-119 431.4 470 54.7
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.3e-118 431.0 474 56.1
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.1e-118 430.3 483 54.9
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.8e-118 429.9 473 53.1
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 4.8e-118 429.1 483 52.4
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 5.3e-117 425.6 471 55.4
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 5.8e-116 422.2 472 53.4
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 9.9e-116 421.4 483 50.1
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 2.9e-115 419.9 477 50.5
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 7.1e-114 415.2 479 51.4
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 1.1e-111 407.9 516 48.1
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.8e-109 400.6 489 50.3
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.6e-108 396.7 474 50.8
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.3e-107 394.4 511 49.7
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.1e-106 391.3 514 47.5
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.9e-106 390.6 479 46.8
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.1e-105 387.1 478 49.0
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 7.9e-105 385.2 480 51.9
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 5.1e-104 382.5 481 48.6
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 6.9e-101 372.1 496 49.2
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 2.0e-100 370.5 477 49.7
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.4e-98 364.4 479 47.8
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.6e-97 360.9 410 54.9
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 2.1e-97 360.5 507 47.7
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.1e-97 360.5 400 54.0
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.7e-97 360.1 404 54.7
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 6.0e-97 359.0 490 49.2
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 7.9e-97 358.6 451 52.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.0e-96 358.2 480 45.6
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 2.3e-96 357.1 474 48.5
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.9e-95 354.0 492 43.5
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 4.3e-95 352.8 475 47.6
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 7.4e-95 352.1 433 49.2
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.6e-94 350.9 478 47.7
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.4e-93 347.1 480 45.6
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.4e-93 347.1 499 46.7
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 1.5e-92 344.4 479 50.3
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.0e-92 344.0 445 49.9
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 3.4e-92 343.2 472 47.0
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 4.5e-92 342.8 500 44.6
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 1.0e-91 341.7 483 48.7
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 4.2e-90 336.3 477 47.4
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 5.5e-90 335.9 493 43.0
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 3.6e-89 333.2 512 42.4
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 4.6e-89 332.8 490 45.3
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 6.1e-89 332.4 490 45.3
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 3.9e-88 329.7 467 45.4
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 7.4e-87 325.5 488 43.6
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.3e-83 314.7 498 42.2
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 2.7e-81 307.0 391 45.8
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 1.8e-80 304.3 498 43.4
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 3.0e-80 303.5 589 37.5
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.0e-79 300.8 467 42.6
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 7.2e-74 282.3 281 58.4
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 2.1e-73 280.8 312 55.4
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 4.7e-73 279.6 446 43.9
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 8.8e-72 275.4 335 49.6
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 4.8e-70 269.6 478 42.7
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 8.2e-70 268.9 311 52.1
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 1.4e-69 268.1 341 47.8
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.3e-67 261.5 434 42.6
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.6e-65 254.6 303 53.5
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.5e-63 248.1 366 42.1
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 9.7e-63 245.4 279 54.1
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.1e-61 240.4 485 36.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 7.0e-61 239.2 489 36.0
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 1.2e-60 238.4 285 49.8
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 5.9e-52 209.5 281 47.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 2.9e-51 207.2 186 59.7
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.2e-46 191.0 434 34.1
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 3.7e-46 190.3 170 58.2
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 4.9e-46 189.9 551 32.5
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 2.4e-45 187.6 199 52.3
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.0e-40 172.2 173 56.1
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.7e-38 164.9 475 32.0
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.1e-34 152.1 204 46.1
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 8.0e-33 146.0 489 30.9
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.4e-32 145.2 131 54.2
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 5.6e-26 123.2 148 46.6
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.0e-19 102.4 117 48.7
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.2e-15 89.0 198 32.3
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 2.6e-15 87.8 127 44.9
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 1.3e-14 85.5 85 44.7
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 2.4e-13 81.3 365 26.0
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 3.9e-11 73.9 164 33.5
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 7.3e-10 69.7 60 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 6.2e-09 66.6 198 26.8
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 1.4e-08 65.5 208 26.9
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.0e-07 61.6 119 32.8
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 4.4e-07 60.5 97 35.1


User provided reference genes

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