Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.6e-230 802.4 392 100.0
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 9.2e-154 547.4 353 79.3
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 6.8e-141 504.6 378 70.6
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.1e-130 470.7 373 65.7
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 6.2e-126 454.9 368 64.4
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 5.3e-125 451.8 365 64.9
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.9e-122 443.4 367 64.6
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 4.2e-122 442.2 369 61.8
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 1.2e-121 440.7 375 62.9
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.1e-121 439.9 379 62.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 2.7e-121 439.5 356 65.4
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.0e-120 437.6 359 64.9
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.0e-120 437.6 376 63.3
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 2.3e-120 436.4 366 63.1
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 6.7e-120 434.9 346 65.3
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.9e-119 433.3 366 63.7
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 4.3e-119 432.2 345 64.6
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 5.6e-119 431.8 343 64.7
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.1e-118 429.9 345 64.1
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 4.0e-117 425.6 351 63.0
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 4.5e-116 422.2 362 62.4
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 4.5e-116 422.2 379 60.9
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 2.9e-115 419.5 365 60.0
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 1.4e-114 417.2 365 60.8
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.9e-114 416.8 377 57.3
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.1e-113 413.3 377 58.1
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 3.5e-113 412.5 339 63.1
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 3.5e-113 412.5 339 63.1
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.0e-112 411.0 342 62.6
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.3e-112 410.6 346 62.4
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.8e-112 410.2 351 61.3
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 6.7e-112 408.3 383 58.0
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 6.7e-112 408.3 385 56.9
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.1e-111 407.5 343 63.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 4.3e-111 405.6 358 60.1
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 7.4e-111 404.8 380 56.8
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 9.6e-111 404.4 382 58.1
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 9.6e-111 404.4 383 56.4
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.3e-110 404.1 367 59.7
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.6e-110 403.7 345 60.6
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 1.6e-110 403.7 342 61.1
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.1e-109 401.0 342 60.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.1e-109 399.4 343 62.1
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 3.1e-109 399.4 350 61.1
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 5.3e-109 398.7 332 62.3
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 9.0e-109 397.9 345 58.3
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 1.5e-108 397.1 371 56.6
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.0e-108 396.7 368 59.0
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 4.5e-108 395.6 344 60.5
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 5.0e-107 392.1 349 61.6
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.1e-106 391.0 335 60.6
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.4e-106 390.6 376 54.5
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 5.5e-106 388.7 336 60.4
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.2e-105 387.5 356 57.0
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 1.6e-105 387.1 356 57.0
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 2.7e-105 386.3 383 54.3
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 4.6e-105 385.6 362 56.9
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 6.1e-105 385.2 329 61.1
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.9e-105 384.8 350 58.0
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 5.7e-103 378.6 358 59.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 5.7e-103 378.6 330 59.1
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 7.4e-103 378.3 357 56.6
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 9.7e-103 377.9 347 57.6
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 9.7e-103 377.9 340 57.4
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.8e-102 376.3 359 56.3
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.8e-102 376.3 359 56.3
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 4.8e-102 375.6 341 57.2
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 6.3e-102 375.2 357 56.0
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 6.3e-102 375.2 360 55.8
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 2.4e-101 373.2 364 57.4
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.3e-99 367.5 346 54.6
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.3e-99 367.5 336 56.5
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 8.8e-96 354.8 358 53.4
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 3.3e-95 352.8 336 60.4
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.8e-93 347.1 336 53.0
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.4e-93 346.7 284 64.4
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 4.5e-92 342.4 329 56.2
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.1e-90 337.8 337 54.3
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.2e-89 334.3 306 55.9
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.4e-88 330.9 324 55.9
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 3.7e-86 322.8 312 57.7
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 3.6e-81 306.2 322 56.2
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.0e-80 304.7 310 57.7
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.4e-77 293.5 317 52.7
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.4e-77 293.5 330 50.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.0e-76 290.4 219 68.0
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 3.8e-75 286.2 362 45.9
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.8e-70 269.2 263 54.8
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 4.5e-68 262.7 188 68.1
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 3.8e-67 259.6 304 45.1
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 4.4e-63 246.1 321 42.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.2e-60 238.0 362 40.6
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 4.5e-60 236.1 326 39.9
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 2.3e-56 223.8 237 54.9
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.0e-52 210.7 242 47.5
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 2.1e-49 200.7 159 65.4
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 5.2e-48 196.1 344 34.3
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 7.5e-47 192.2 324 38.6
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 4.9e-46 189.5 383 32.1
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.1e-45 188.3 218 46.8
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.5e-42 177.9 272 37.9
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 4.9e-38 162.9 85 88.2
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 2.1e-36 157.5 178 50.6
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 3.0e-35 153.7 97 76.3
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 3.6e-33 146.7 86 80.2
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-32 144.8 98 70.4
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 2.4e-32 144.1 91 79.1
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.8e-32 142.5 141 52.5
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 6.8e-32 142.5 103 63.1
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 5.6e-26 122.9 98 60.2
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.7e-22 111.3 138 46.4
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.9e-22 110.5 139 42.4
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 4.8e-17 93.2 360 26.1
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.0e-15 87.8 288 26.4
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.1e-10 72.0 57 64.9
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 1.8e-08 64.7 28 92.9


User provided reference genes

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