Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.9e-65 252.3 124 100.0
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 2.4e-39 165.6 90 91.1
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 4.1e-39 164.9 124 66.1
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.5e-30 134.8 124 57.3
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 3.2e-28 128.6 124 58.9
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.2e-28 128.3 124 54.8
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 9.4e-28 127.1 124 54.8
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.1e-27 125.9 124 54.0
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 3.3e-25 118.6 124 52.4
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.3e-25 118.6 126 54.0
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.3e-25 118.6 124 52.4
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 1.7e-24 116.3 124 52.4
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.8e-24 115.5 125 52.0
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.8e-24 115.5 125 52.0
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 4.8e-24 114.8 109 57.8
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.4e-23 112.5 128 51.6
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.4e-23 112.5 126 50.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 4.1e-23 111.7 124 53.2
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.3e-23 111.3 125 51.2
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 9.1e-23 110.5 127 48.0
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.2e-22 110.2 125 50.4
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 1.6e-22 109.8 121 47.1
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 1.0e-21 107.1 107 55.1
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 1.3e-21 106.7 132 47.0
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.2e-21 105.9 124 51.6
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.9e-21 105.5 124 52.4
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.9e-21 105.5 124 52.4
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 3.8e-21 105.1 123 47.2
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 5.0e-21 104.8 99 54.5
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.9e-20 102.8 124 50.8
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 9.4e-20 100.5 124 49.2
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 1.2e-19 100.1 126 46.8
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 2.7e-19 99.0 120 40.8
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 6.1e-19 97.8 99 55.6
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.8e-18 94.0 129 47.3
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.0e-17 92.8 129 40.3
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.6e-17 92.4 105 48.6
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.4e-17 91.7 125 45.6
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 4.4e-17 91.7 101 56.4
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 4.4e-17 91.7 99 47.5
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 4.4e-17 91.7 133 46.6
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.7e-17 91.3 83 55.4
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 9.8e-17 90.5 130 47.7
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.3e-16 90.1 97 43.3
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.3e-16 90.1 97 43.3
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.7e-16 89.7 99 48.5
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 2.2e-16 89.4 124 42.7
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 2.2e-16 89.4 124 42.7
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 2.2e-16 89.4 120 41.7
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.8e-16 89.0 122 40.2
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 4.8e-16 88.2 128 43.0
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 4.8e-16 88.2 99 44.4
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 8.3e-16 87.4 124 41.9
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 8.3e-16 87.4 128 43.0
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.1e-15 87.0 127 45.7
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.4e-15 86.7 119 46.2
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.4e-15 86.7 104 46.2
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.4e-15 86.7 99 48.5
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.8e-15 86.3 106 45.3
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 3.1e-15 85.5 127 43.3
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 4.1e-15 85.1 124 37.1
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.0e-14 82.8 119 42.9
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 3.5e-14 82.0 92 46.7
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 4.5e-14 81.6 117 37.6
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 5.9e-14 81.3 122 35.2
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.3e-13 80.1 132 44.7
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.7e-13 79.7 126 39.7
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.2e-13 79.3 118 39.8
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.2e-13 79.3 129 41.1
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.2e-13 79.3 101 51.5
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.2e-13 79.3 101 51.5
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 2.9e-13 79.0 101 44.6
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 2.9e-13 79.0 109 37.6
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.9e-13 79.0 131 40.5
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.8e-13 78.6 128 40.6
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 8.5e-13 77.4 118 36.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 1.5e-12 76.6 114 38.6
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 2.5e-12 75.9 128 42.2
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.5e-12 75.9 119 36.1
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 3.2e-12 75.5 109 41.3
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 3.2e-12 75.5 109 41.3
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 4.2e-12 75.1 118 41.5
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 5.5e-12 74.7 123 38.2
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 5.5e-12 74.7 123 37.4
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 9.4e-12 73.9 106 39.6
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 2.7e-11 72.4 98 44.9
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.7e-11 71.6 105 43.8
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 6.1e-11 71.2 103 39.8
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.3e-10 69.3 105 40.0
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 5.2e-10 68.2 50 64.0
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 8.8e-10 67.4 93 40.9
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 1.8e-07 59.7 128 32.0
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.4e-07 59.3 98 39.8
Glyma.10G112600 Glycine max HOM05D007637 ORTHO05D009508 4.1e-07 58.5 70 38.6
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.1e-07 58.5 51 54.9
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 5.4e-07 58.2 91 39.6
ECA232G5064 Erigeron canadensis HOM05D007637 ORTHO05D009508 9.2e-07 57.4 74 41.9
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 2.7e-06 55.8 103 33.0


User provided reference genes

Program Settings