Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007860 Carpinus fangiana HOM05D000390 ORTHO05D026359 1.1e-56 223.4 147 100.0
Haze_14210 Corylus avellana HOM05D000390 ORTHO05D001192 1.0e-44 183.7 140 93.6
CiPaw.03G067600 Carya illinoinensis HOM05D000390 ORTHO05D001192 1.6e-21 106.7 138 61.6
Cfa005787 Carpinus fangiana HOM05D000390 ORTHO05D001192 1.8e-17 93.2 146 45.9
Haze_05054 Corylus avellana HOM05D000390 ORTHO05D026359 3.5e-13 79.0 146 55.5
Gorai.007G178800 Gossypium raimondii HOM05D000390 ORTHO05D001192 1.6e-10 70.1 138 53.6
Gohir.D11G167700 Gossypium hirsutum HOM05D000390 ORTHO05D001192 2.1e-10 69.7 138 55.1
Gohir.A11G161500 Gossypium hirsutum HOM05D000390 ORTHO05D001192 1.8e-09 66.6 138 52.2
MELO3C022842.2 Cucumis melo HOM05D000390 ORTHO05D001192 4.0e-09 65.5 142 36.6
FAN23G1779 Fragaria x ananassa HOM05D000390 ORTHO05D001192 4.0e-09 65.5 138 51.4
Thecc.04G123400 Theobroma cacao HOM05D000390 ORTHO05D001192 4.0e-09 65.5 138 53.6
arahy.Tifrunner.gnm1.ann1.LDP0G3 Arachis hypogaea HOM05D000390 ORTHO05D001192 6.8e-09 64.7 138 33.3
arahy.Tifrunner.gnm1.ann1.V5N9VT Arachis hypogaea HOM05D000390 ORTHO05D001192 8.9e-09 64.3 138 33.3
RcHm_v2.0_Chr3g0493571 Rosa chinensis HOM05D000390 ORTHO05D001192 3.4e-08 62.4 141 47.5
GSVIVG01030893001 Vitis vinifera HOM05D000390 ORTHO05D001192 4.4e-08 62.0 41 65.9
Atru.chr1.1773 Acer truncatum HOM05D000390 ORTHO05D001192 7.5e-08 61.2 143 36.4
FAN26G2380 Fragaria x ananassa HOM05D000390 ORTHO05D001192 1.7e-07 60.1 138 54.3
ClCG03G008740 Citrullus lanatus HOM05D000390 ORTHO05D001192 3.7e-07 58.9 139 36.7
Cc07_g08260 Coffea canephora HOM05D000390 ORTHO05D001192 4.9e-07 58.5 40 72.5
Actinidia36360 Actinidia chinensis HOM05D000390 ORTHO05D001192 1.1e-06 57.4 41 73.2
FAN28G2196 Fragaria x ananassa HOM05D000390 ORTHO05D026359 1.1e-06 57.4 138 53.6
Actinidia04705 Actinidia chinensis HOM05D000390 ORTHO05D026359 1.4e-06 57.0 30 86.7
TWI53G1674 Tripterygium wilfordii HOM05D000390 ORTHO05D001192 1.9e-06 56.6 138 32.6
vmacro05497 Vaccinium macrocarpon HOM05D000390 ORTHO05D001192 1.9e-06 56.6 144 50.7
Aa31LG9G17300 Aethionema arabicum HOM05D000390 ORTHO05D001192 2.4e-06 56.2 147 29.9
EL10Ac2g04498 Beta vulgaris HOM05D000390 ORTHO05D001192 2.4e-06 56.2 51 58.8
Duzib138G1453 Durio zibethinus HOM05D000390 ORTHO05D001192 3.2e-06 55.8 33 75.8
TAR629G0648 Trochodendron aralioides HOM05D000390 ORTHO05D001192 4.1e-06 55.5 34 76.5
CSS0029078 Camellia sinensis var. sinensis HOM05D000390 ORTHO05D001192 5.4e-06 55.1 138 51.4
Prupe.3G152000 Prunus persica HOM05D000390 ORTHO05D001192 5.4e-06 55.1 46 60.9
CANSAT78G1481 Cannabis sativa HOM05D000390 ORTHO05D001192 7.0e-06 54.7 30 80.0
Dinv19002 Davidia involucrata HOM05D000390 ORTHO05D001192 9.2e-06 54.3 29 86.2
THA.LOC104825614 Tarenaya hassleriana HOM05D000390 ORTHO05D001192 9.2e-06 54.3 34 61.8


User provided reference genes

Program Settings