Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 0.0e+00 1289.6 651 100.0
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 1.1e-305 1052.7 632 87.2
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 1.0e-290 1003.0 631 81.0
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 3.3e-281 971.5 632 78.6
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 5.6e-273 944.1 637 75.5
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 1.2e-267 926.4 632 74.1
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 1.8e-263 912.5 632 73.1
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 4.9e-261 904.4 632 72.3
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 1.6e-259 899.4 632 71.8
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 1.8e-258 896.0 632 71.5
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 3.9e-258 894.8 636 71.1
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 3.9e-258 894.8 632 70.3
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 3.7e-256 888.3 635 70.4
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 6.2e-256 887.5 635 70.2
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.4e-255 886.3 632 72.0
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 4.0e-255 884.8 634 70.2
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 1.2e-254 883.2 635 70.1
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.2e-254 883.2 635 71.0
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 3.4e-254 881.7 632 69.8
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 3.8e-253 878.2 663 68.0
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 4.9e-253 877.9 632 71.5
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 2.5e-252 875.5 631 69.7
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 7.1e-252 874.0 631 69.7
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 2.7e-251 872.1 631 70.5
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 1.8e-250 869.4 631 69.3
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 1.5e-249 866.3 631 69.6
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 2.1e-248 862.4 632 68.8
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 6.3e-248 860.9 631 68.8
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 2.4e-247 859.0 632 68.5
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 4.1e-247 858.2 632 68.7
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 9.0e-247 857.1 632 68.4
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 1.4e-244 849.7 635 68.0
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 3.2e-244 848.6 632 67.6
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 5.5e-244 847.8 631 67.0
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 9.3e-244 847.0 632 68.8
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 1.6e-243 846.3 631 67.2
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 2.7e-243 845.5 679 65.2
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 4.6e-243 844.7 635 68.0
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 7.9e-243 844.0 666 64.4
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 3.0e-242 842.0 632 67.1
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 6.7e-242 840.9 631 67.0
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 3.3e-241 838.6 634 66.6
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 7.4e-241 837.4 634 68.0
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 6.3e-240 834.3 631 67.2
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 2.6e-238 828.9 631 67.0
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 3.4e-238 828.6 631 67.2
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 3.4e-238 828.6 635 66.3
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 6.5e-237 824.3 631 66.1
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 2.5e-236 822.4 649 64.6
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.6e-235 819.7 635 67.2
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 3.0e-234 815.5 666 62.5
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.1e-233 813.5 634 64.8
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 1.4e-231 806.6 632 65.8
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 4.1e-231 805.1 637 63.4
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 5.3e-231 804.7 570 72.1
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 6.9e-231 804.3 712 60.3
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 1.0e-229 800.4 702 59.7
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 2.9e-229 798.9 631 63.5
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 5.0e-229 798.1 637 65.0
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 1.9e-228 796.2 636 63.4
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 7.2e-228 794.3 636 62.4
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 1.2e-227 793.5 636 63.1
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 1.2e-227 793.5 636 63.1
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 1.2e-227 793.5 635 62.5
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 2.7e-227 792.3 631 63.2
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 7.9e-227 790.8 637 62.5
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 3.0e-226 788.9 571 69.5
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 3.9e-226 788.5 635 62.4
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 9.7e-225 783.9 635 62.7
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 3.7e-224 781.9 661 60.2
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 6.3e-224 781.2 620 64.5
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 8.2e-224 780.8 626 62.5
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 1.1e-223 780.4 688 58.4
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 1.8e-223 779.6 638 61.4
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 2.4e-223 779.2 687 61.0
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 7.0e-223 777.7 634 62.5
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 1.0e-221 773.9 636 61.5
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.3e-221 773.5 621 64.1
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 9.4e-220 767.3 557 69.7
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 2.0e-217 759.6 707 56.2
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 2.4e-215 752.7 634 62.6
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 7.2e-212 741.1 634 61.2
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 1.2e-211 740.3 554 66.4
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 4.7e-211 738.4 623 60.7
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 6.8e-210 734.6 668 58.8
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 7.5e-209 731.1 636 58.0
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.4e-207 726.9 619 61.2
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 2.3e-205 719.5 558 66.7
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 6.8e-202 708.0 632 57.9
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 1.3e-200 703.7 631 57.4
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 1.1e-199 700.7 632 57.1
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 1.2e-198 697.2 636 57.1
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 4.1e-191 672.2 660 53.8
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 6.6e-189 664.8 500 69.6
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 8.9e-186 654.4 631 54.5
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 6.0e-182 641.7 616 55.8
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 1.3e-173 614.0 635 53.2
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 8.1e-171 604.7 480 64.2
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 8.9e-170 601.3 577 54.9
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 1.6e-155 553.9 655 46.1
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 1.3e-152 544.3 639 47.4
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 2.9e-136 490.0 324 74.4
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 2.9e-136 490.0 295 82.4
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 1.0e-128 464.9 674 41.4
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 1.0e-112 411.8 560 42.7
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 1.8e-93 347.8 618 39.8
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 1.3e-88 331.6 299 57.2
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 1.3e-83 315.1 340 51.8
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 3.1e-69 267.3 652 31.6
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 4.7e-62 243.4 239 54.4
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 3.6e-54 217.2 335 39.7
CARHR162470 Cardamine hirsuta HOM05D002544 ORTHO05D007856 3.3e-47 194.1 154 59.7
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 7.3e-47 193.0 325 35.7
MCO14G034 Micromonas commoda HOM05D002544 ORTHO05D007856 6.4e-35 153.3 732 25.1
Zm00001eb289130 Zea mays HOM05D002544 ORTHO05D007856 5.4e-34 150.2 115 65.2
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 5.8e-28 130.2 130 50.0
CBR_g37928 Chara braunii HOM05D000601 ORTHO05D000301 1.1e-26 125.9 173 43.4
CBR_g26304 Chara braunii HOM05D002544 ORTHO05D007856 7.1e-26 123.2 114 57.9
Cc07_g13200 Coffea canephora HOM05D002544 ORTHO05D007856 1.4e-21 109.0 73 68.5
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 6.9e-21 106.7 102 56.9
Zm00001eb340210 Zea mays HOM05D002544 ORTHO05D007856 1.2e-20 105.9 112 51.8
HPP92_026942 Vanilla planifolia HOM05D002544 ORTHO05D007856 8.4e-19 99.8 74 59.5
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 4.6e-17 94.0 83 59.0
FvH4_4g11392 Fragaria vesca HOM05D000005 ORTHO05D000012 8.2e-14 83.2 50 76.0
FAN02G2717 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.4e-13 82.4 50 76.0
FAN12G0356 Fragaria x ananassa HOM05D002544 ORTHO05D007856 4.1e-13 80.9 50 74.0
HPP92_021313 Vanilla planifolia HOM05D002544 ORTHO05D007856 4.1e-13 80.9 62 56.5
HPP92_021314 Vanilla planifolia HOM05D002544 ORTHO05D007856 9.0e-13 79.7 48 68.8
FAN02G1722 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.6e-12 78.2 50 74.0
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 3.2e-10 71.2 51 58.8
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 3.2e-10 71.2 51 58.8
QL02p059474 Quercus lobata HOM05D002544 ORTHO05D007856 1.0e-08 66.2 33 87.9
SGA_v2.0_scaffold17G07933 Striga asiatica HOM05D002544 ORTHO05D399483 5.7e-07 60.5 36 66.7


User provided reference genes

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