Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 9.5e-234 813.1 415 100.0
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 1.9e-181 639.4 400 78.2
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 4.4e-170 601.7 402 74.6
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.1e-168 597.0 420 70.2
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 7.2e-165 584.3 398 71.9
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.6e-164 582.0 402 71.4
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 8.0e-164 580.9 403 72.7
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 2.3e-163 579.3 398 72.6
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.6e-162 575.9 398 71.6
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 3.3e-162 575.5 389 72.2
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.2e-161 572.8 447 68.0
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 2.8e-161 572.4 383 73.9
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.1e-160 570.5 382 73.0
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 7.0e-160 567.8 404 69.6
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 2.0e-159 566.2 402 68.4
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 3.5e-159 565.5 400 69.2
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.9e-159 564.7 397 72.5
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 5.9e-159 564.7 385 71.4
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.0e-158 563.9 401 67.3
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 2.2e-158 562.8 396 68.2
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 8.5e-158 560.8 400 71.0
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.5e-157 560.1 384 70.3
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.5e-157 559.3 403 68.7
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 5.5e-157 558.1 395 70.9
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 5.5e-157 558.1 398 67.8
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 7.2e-157 557.8 397 69.5
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.6e-156 555.4 385 69.4
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.8e-155 553.1 415 67.7
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 4.0e-155 552.0 408 67.4
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 5.2e-155 551.6 399 68.4
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 1.5e-154 550.1 371 70.9
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.4e-152 543.5 383 69.2
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.4e-152 542.7 401 66.1
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.4e-152 542.7 399 67.2
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.1e-152 542.3 379 69.9
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 4.1e-152 542.0 379 69.7
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 7.0e-152 541.2 381 67.2
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 7.0e-152 541.2 401 66.3
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 2.0e-151 539.7 399 66.7
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 2.0e-151 539.7 395 65.8
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 4.5e-151 538.5 384 66.9
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-150 536.6 383 68.7
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.5e-150 534.3 383 68.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 3.2e-149 532.3 392 67.9
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 1.2e-148 530.4 399 64.9
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.1e-148 529.6 380 66.6
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.0e-147 527.3 384 65.6
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 5.2e-147 525.0 389 66.8
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.6e-146 522.7 389 66.3
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.6e-146 522.7 402 67.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.4e-146 522.3 387 66.7
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.7e-145 520.0 389 66.8
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.7e-145 520.0 379 67.3
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 7.0e-144 514.6 390 63.8
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.0e-143 513.1 433 61.0
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 3.5e-143 512.3 387 66.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 5.9e-143 511.5 387 64.9
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 6.6e-142 508.1 387 66.1
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.6e-140 503.4 399 63.7
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 2.1e-140 503.1 383 63.4
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.1e-140 501.5 383 66.6
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 6.1e-140 501.5 373 66.2
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.7e-137 493.4 280 88.9
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.9e-137 492.7 383 65.5
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 8.3e-137 491.1 389 65.3
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.4e-136 490.3 389 61.7
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.0e-135 486.5 421 60.3
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 7.8e-135 484.6 362 65.2
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 7.8e-135 484.6 336 68.5
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.0e-134 484.2 386 64.5
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.0e-134 484.2 386 64.2
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 3.9e-134 482.3 371 62.3
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 5.0e-134 481.9 386 64.0
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 5.0e-134 481.9 386 64.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 6.8e-131 471.5 395 59.2
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 2.0e-130 469.9 423 58.6
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 2.0e-130 469.9 385 61.3
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.0e-127 458.4 296 73.6
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.5e-125 453.8 314 69.1
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 3.3e-125 452.6 350 66.9
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 3.4e-122 442.6 289 72.3
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.1e-120 435.6 400 55.8
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 3.5e-119 432.6 376 57.7
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.1e-116 423.3 305 65.9
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.5e-114 417.2 287 68.6
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 6.4e-113 411.8 383 54.3
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 7.8e-111 404.8 297 65.7
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.4e-96 357.5 237 72.2
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 9.3e-96 354.8 310 53.9
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 7.6e-90 335.1 245 67.3
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.2e-87 327.8 256 66.0
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.7e-84 316.2 225 69.3
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.2e-81 307.0 259 58.3
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.1e-80 304.7 388 44.8
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 5.7e-69 265.8 215 61.9
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 8.5e-65 251.9 375 38.7
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.8e-62 244.2 201 60.7
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.3e-60 238.0 163 71.8
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.2e-57 227.3 158 70.9
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.0e-49 201.8 149 67.1
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.7e-45 186.0 393 33.8
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.5e-42 176.8 147 63.3
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.4e-37 160.2 149 53.0
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.6e-31 140.2 90 78.9
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 5.2e-30 136.3 99 68.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 2.8e-23 114.0 84 64.3
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.9e-20 104.0 74 64.9
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 6.4e-20 102.8 389 26.2
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.8e-19 101.3 191 37.7
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 2.4e-19 100.9 383 27.7
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 3.0e-17 94.0 312 30.1
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 5.0e-17 93.2 417 25.9
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.1e-14 85.5 64 64.1
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.4e-14 85.1 68 61.8
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.8e-13 79.7 110 40.0
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.7e-12 78.2 64 64.1
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 3.7e-12 77.0 65 50.8
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 7.0e-11 72.8 50 68.0


User provided reference genes

Program Settings