Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 1.6e-67 259.2 126 100.0
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 4.5e-62 241.1 126 93.7
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 1.4e-18 96.7 96 42.7
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.0e-18 95.1 100 47.0
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 6.9e-18 94.4 99 47.5
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 8.4e-16 87.4 105 40.0
Ciclev10013077m.g Citrus clementina HOM05D008138 ORTHO05D010043 5.4e-15 84.7 106 40.6
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.0e-13 80.5 101 41.6
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.3e-13 80.1 94 40.4
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.3e-12 75.1 104 38.5
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.3e-12 75.1 104 38.5
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.4e-12 74.3 94 38.3
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.6e-11 73.2 104 37.5
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.8e-11 71.6 94 37.2
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 5.3e-10 68.2 121 33.1
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 5.3e-10 68.2 87 40.2
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 9.0e-10 67.4 87 35.6
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 1.2e-09 67.0 76 47.4
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 2.0e-09 66.2 87 34.5
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 2.6e-09 65.9 101 34.7
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 4.5e-09 65.1 89 39.3
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 4.5e-09 65.1 89 41.6
QL10p055255 Quercus lobata HOM05D008138 ORTHO05D010043 5.8e-09 64.7 95 35.8
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 7.6e-09 64.3 91 35.2
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 7.6e-09 64.3 97 36.1
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 9.9e-09 63.9 78 37.2
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 6.4e-08 61.2 88 37.5
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 6.4e-08 61.2 111 35.1
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.1e-07 60.5 101 36.6
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 1.4e-07 60.1 95 34.7
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-07 59.7 118 30.5
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 2.4e-07 59.3 74 37.8
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 4.2e-07 58.5 68 39.7
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.5e-07 58.2 118 29.7
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 5.5e-07 58.2 95 32.6
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 9.3e-07 57.4 85 38.8
MSTRG.19633 Avicennia marina HOM05D008138 ORTHO05D010043 1.2e-06 57.0 72 38.9
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 1.2e-06 57.0 58 44.8
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 2.1e-06 56.2 90 34.4
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.7e-06 55.8 63 42.9
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.9e-06 54.3 99 33.3


User provided reference genes

Program Settings