Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.9e-58 228.4 120 100.0
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 1.4e-47 193.0 116 85.3
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.5e-46 188.7 111 87.4
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.5e-46 188.7 111 87.4
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 2.5e-46 188.7 112 85.7
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 2.5e-46 188.7 116 81.9
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 5.7e-46 187.6 111 86.5
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 5.7e-46 187.6 111 86.5
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.3e-45 186.4 110 88.2
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.3e-45 186.4 120 82.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.2e-45 185.7 112 84.8
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.8e-45 185.3 111 85.6
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 3.7e-45 184.9 121 80.2
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 3.7e-45 184.9 112 83.0
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.1e-44 183.3 119 81.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-44 183.3 112 83.0
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 5.3e-44 181.0 110 84.5
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 5.3e-44 181.0 110 83.6
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 6.9e-44 180.6 118 80.5
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.9e-44 180.6 121 79.3
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.9e-44 180.6 121 79.3
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.2e-43 179.9 112 80.4
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.6e-43 178.7 113 83.2
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 3.4e-43 178.3 107 83.2
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 3.4e-43 178.3 111 81.1
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 4.5e-43 177.9 111 80.2
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 7.7e-43 177.2 114 78.9
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.0e-42 176.8 113 79.6
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.3e-42 176.4 106 84.9
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.3e-42 176.4 112 81.2
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.3e-42 176.4 112 81.2
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.7e-42 176.0 113 79.6
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 3.8e-42 174.9 113 78.8
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 8.5e-42 173.7 113 77.9
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 8.5e-42 173.7 110 80.0
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.1e-41 173.3 113 76.1
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.4e-41 172.9 110 80.9
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.5e-41 172.2 109 78.9
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 3.2e-41 171.8 117 74.4
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 3.2e-41 171.8 108 78.7
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 3.2e-41 171.8 108 78.7
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 4.2e-41 171.4 111 77.5
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.5e-41 171.0 121 76.0
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 5.5e-41 171.0 108 79.6
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 5.5e-41 171.0 111 79.3
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 7.2e-41 170.6 111 76.6
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 7.2e-41 170.6 111 77.5
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.2e-40 169.9 107 81.3
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.6e-40 169.5 111 76.6
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 2.1e-40 169.1 107 77.6
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 2.1e-40 169.1 111 78.4
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.1e-40 169.1 111 78.4
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.7e-40 167.9 111 78.4
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.7e-40 167.9 111 78.4
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 4.7e-40 167.9 111 76.6
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 4.7e-40 167.9 112 77.7
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 6.1e-40 167.5 110 77.3
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 6.1e-40 167.5 113 74.3
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.0e-39 166.8 111 75.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.8e-39 166.0 114 75.4
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.8e-39 166.0 110 78.2
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.8e-39 166.0 106 78.3
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.5e-38 162.9 113 70.8
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.0e-38 162.5 114 71.1
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 2.0e-38 162.5 111 76.6
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.6e-38 162.2 110 75.5
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 2.2e-37 159.1 109 74.3
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 6.3e-37 157.5 105 76.2
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.3e-37 157.5 96 80.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-35 152.1 101 74.3
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 2.6e-35 152.1 112 69.6
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 5.9e-35 151.0 110 71.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.7e-35 150.6 113 69.0
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.0e-34 150.2 114 67.5
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 5.0e-34 147.9 96 80.2
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 8.5e-34 147.1 94 79.8
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.5e-33 145.6 100 77.0
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 3.2e-33 145.2 107 67.3
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.2e-33 144.8 111 65.8
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 9.4e-33 143.7 112 67.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 2.1e-32 142.5 104 68.3
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 2.1e-32 142.5 104 67.3
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 2.7e-32 142.1 121 65.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 4.7e-32 141.4 104 67.3
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.0e-31 138.7 114 65.8
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 6.7e-31 137.5 104 65.4
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.6e-30 135.6 116 61.2
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 5.7e-30 134.4 114 62.3
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 7.4e-30 134.0 120 61.7
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 4.8e-29 131.3 77 85.7
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 4.8e-29 131.3 108 63.9
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.8e-28 129.4 76 86.8
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 9.1e-28 127.1 76 82.9
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 5.9e-27 124.4 89 74.2
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.7e-27 124.0 113 60.2
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 7.7e-27 124.0 113 60.2
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.3e-26 123.2 114 57.0
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.3e-26 123.2 114 57.0
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-26 123.2 111 61.3
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.7e-26 122.9 77 79.2
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.7e-26 122.9 77 79.2
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.9e-26 122.1 113 57.5
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.1e-25 120.2 108 60.2
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.5e-25 119.8 112 58.0
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.1e-24 115.9 91 63.7
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 1.0e-23 113.6 113 56.6
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 5.2e-23 111.3 116 53.4
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 8.8e-23 110.5 110 53.6
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 1.2e-22 110.2 96 60.4
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.6e-22 109.0 74 73.0
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 7.5e-22 107.5 110 52.7
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 7.5e-22 107.5 108 53.7
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 7.5e-22 107.5 59 88.1
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.5e-22 107.5 59 88.1
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 9.7e-22 107.1 73 74.0
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 9.7e-22 107.1 73 74.0
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 1.7e-21 106.3 107 54.2
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.2e-21 105.9 71 74.6
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.2e-21 105.9 71 74.6
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 4.8e-21 104.8 73 71.2
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 5.3e-20 101.3 115 43.5
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.0e-20 100.9 88 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 5.5e-17 91.3 108 42.6
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.2e-16 90.1 74 55.4
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 6.1e-16 87.8 103 45.6
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 4.4e-14 81.6 97 40.2
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.4e-12 76.6 43 88.4
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 9.1e-12 73.9 46 76.1
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.9e-10 68.9 57 56.1
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.4e-06 55.5 111 36.0


User provided reference genes

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