Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007688 Carpinus fangiana HOM05D011725 ORTHO05D016914 5.1e-165 584.3 294 100.0
Cfa005675 Carpinus fangiana HOM05D011725 ORTHO05D016914 3.3e-148 528.5 278 95.3
Cfa017593 Carpinus fangiana HOM05D011725 ORTHO05D016914 2.5e-140 502.3 274 90.1
Cfa002544 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.3e-136 490.0 278 89.9
Cfa019942 Carpinus fangiana HOM05D020463 ORTHO05D022255 5.0e-27 125.9 271 35.8
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 7.2e-26 122.1 213 39.4
Cfa002218 Carpinus fangiana HOM05D011725 ORTHO05D016914 3.6e-25 119.8 70 80.0
Haze_01657 Corylus avellana HOM05D011725 ORTHO05D016914 5.7e-23 112.5 268 32.8
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 3.6e-17 93.2 201 31.8
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 3.6e-17 93.2 197 33.5
Haze_22035 Corylus avellana HOM05D011725 ORTHO05D016914 1.4e-16 91.3 106 46.2
Haze_22038 Corylus avellana HOM05D011725 ORTHO05D016914 1.4e-16 91.3 106 46.2
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.4e-16 91.3 198 35.9
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 5.2e-16 89.4 193 33.2
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.5e-15 87.8 213 30.0
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 2.6e-15 87.0 211 33.6
Haze_23755 Corylus avellana HOM05D011725 ORTHO05D016914 2.6e-15 87.0 85 47.1
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 4.4e-15 86.3 202 31.7
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 8.2e-14 82.0 211 29.4
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 2.4e-13 80.5 197 33.0
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 9.1e-13 78.6 203 31.0
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-12 78.2 204 27.9
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-12 77.4 204 27.9
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-12 77.4 204 27.9
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 2.0e-12 77.4 203 30.5
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.0e-12 77.4 228 26.3
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 2.6e-12 77.0 205 29.8
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 3.5e-12 76.6 202 29.7
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 3.5e-12 76.6 196 30.1
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.5e-12 76.3 204 30.4
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 5.9e-12 75.9 199 29.6
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 5.9e-12 75.9 203 30.0
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 5.9e-12 75.9 203 30.0
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 5.9e-12 75.9 203 30.0
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 7.7e-12 75.5 198 33.3
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-11 75.1 194 32.0
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 1.3e-11 74.7 203 30.0
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 1.7e-11 74.3 180 30.6
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.7e-11 74.3 210 28.1
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.9e-11 73.6 219 26.9
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 3.8e-11 73.2 192 30.2
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 5.0e-11 72.8 192 30.2
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 6.5e-11 72.4 204 26.5
CiPaw.05G159600 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.5e-10 71.2 209 29.2
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 3.2e-10 70.1 201 27.9
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 3.2e-10 70.1 198 29.8
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 4.2e-10 69.7 198 30.8
TWI74G1594 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 5.5e-10 69.3 198 29.8
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.2e-10 68.9 191 28.8
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 7.2e-10 68.9 200 30.0
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 9.4e-10 68.6 209 28.2
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 1.2e-09 68.2 208 27.9
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-09 68.2 202 27.2
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-09 68.2 202 27.2
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 1.6e-09 67.8 197 29.4
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.6e-09 67.8 198 30.8
CiPaw.10G123700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.1e-09 67.4 197 25.4
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.1e-09 67.4 59 47.5
Oeu041025.1 Olea europaea HOM05D000254 ORTHO05D000921 2.1e-09 67.4 61 52.5
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 2.1e-09 67.4 198 29.8
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.6e-09 66.6 199 27.6
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 6.1e-09 65.9 194 25.8
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 8.0e-09 65.5 197 27.4
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.0e-08 65.1 67 44.8
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.4e-08 64.7 196 24.0
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 1.4e-08 64.7 210 31.4
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 1.8e-08 64.3 182 26.4
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 2.3e-08 63.9 197 27.4
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 2.3e-08 63.9 202 28.2
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 2.3e-08 63.9 210 29.0
Haze_06051 Corylus avellana HOM05D020463 ORTHO05D022255 4.0e-08 63.2 152 29.6
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 4.0e-08 63.2 197 26.4
QL06p025400 Quercus lobata HOM05D003171 ORTHO05D000921 5.2e-08 62.8 184 32.6
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 6.7e-08 62.4 197 25.9
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 6.7e-08 62.4 197 25.9
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 6.7e-08 62.4 197 25.9
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 8.8e-08 62.0 84 38.1
FAN22G1922 Fragaria x ananassa HOM05D003171 ORTHO05D000921 8.8e-08 62.0 196 25.5
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 8.8e-08 62.0 205 24.9
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 8.8e-08 62.0 62 45.2
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.2e-07 61.6 198 28.8
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 1.5e-07 61.2 210 27.1
Ciclev10033478m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.0e-07 60.8 182 28.0
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-07 60.8 197 26.4
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.6e-07 60.5 212 25.0
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 2.6e-07 60.5 71 35.2
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 2.6e-07 60.5 199 31.2
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.4e-07 59.7 182 25.8
Haze_01723 Corylus avellana HOM05D011725 ORTHO05D016914 4.4e-07 59.7 63 46.0
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 4.4e-07 59.7 190 30.0
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 5.7e-07 59.3 200 27.0
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 7.5e-07 58.9 196 27.6
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 7.5e-07 58.9 197 26.4
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 7.5e-07 58.9 197 25.4
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 7.5e-07 58.9 106 30.2
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 9.7e-07 58.5 188 27.1
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.3e-06 58.2 207 28.5
Cfa005740 Carpinus fangiana HOM05D020463 ORTHO05D022255 1.3e-06 58.2 114 32.5
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 1.3e-06 58.2 162 29.0
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 2.8e-06 57.0 58 41.4
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 2.8e-06 57.0 72 38.9
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 2.8e-06 57.0 200 30.0
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.7e-06 56.6 200 29.0
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.7e-06 56.6 87 36.8
Ciclev10017608m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.7e-06 56.6 81 38.3
Haze_08961 Corylus avellana HOM05D020463 ORTHO05D022255 4.8e-06 56.2 79 34.2
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 4.8e-06 56.2 78 38.5
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 4.8e-06 56.2 174 28.2
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 4.8e-06 56.2 203 24.1
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 4.8e-06 56.2 56 53.6
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 4.8e-06 56.2 203 24.1
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 6.3e-06 55.8 203 24.1
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 8.2e-06 55.5 105 36.2
Oeu050871.1 Olea europaea HOM05D003171 ORTHO05D000921 8.2e-06 55.5 55 47.3


User provided reference genes

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