Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 3.9e-90 334.7 163 100.0
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 4.5e-86 321.2 163 96.9
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.2e-54 216.9 164 68.9
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 5.2e-50 201.4 159 61.6
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.8e-48 195.7 164 60.4
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.3e-45 186.8 167 59.9
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 6.1e-43 177.9 156 57.7
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.0e-41 172.9 164 54.3
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 5.7e-41 171.4 155 56.1
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 2.8e-40 169.1 164 53.0
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 1.1e-39 167.2 151 57.6
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.8e-39 166.4 157 55.4
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 4.1e-39 165.2 157 54.8
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 5.3e-39 164.9 154 54.5
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.2e-38 163.7 164 53.0
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 1.2e-38 163.7 154 54.5
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 7.7e-38 161.0 152 53.9
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 3.8e-37 158.7 159 54.1
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.0e-37 158.3 152 53.9
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 5.0e-37 158.3 154 57.8
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 5.0e-37 158.3 154 57.8
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 5.0e-37 158.3 163 54.6
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 8.5e-37 157.5 152 52.6
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 8.5e-37 157.5 159 53.5
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.1e-36 157.1 164 51.8
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 1.5e-36 156.8 134 59.0
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.9e-36 156.4 111 71.2
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.9e-36 156.4 131 60.3
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 1.9e-36 156.4 154 50.0
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 2.5e-36 156.0 152 54.6
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 3.2e-36 155.6 164 50.0
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 5.5e-36 154.8 168 48.2
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.6e-35 153.3 151 54.3
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 2.1e-35 152.9 150 52.7
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 3.6e-35 152.1 163 50.9
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 4.7e-35 151.8 109 67.0
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 6.1e-35 151.4 154 53.2
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 6.1e-35 151.4 164 49.4
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 8.0e-35 151.0 163 49.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 1.4e-34 150.2 156 51.3
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 4.0e-34 148.7 152 53.3
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 5.2e-34 148.3 159 49.7
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 6.8e-34 147.9 157 50.3
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.5e-33 146.7 151 49.7
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 2.6e-33 146.0 97 68.0
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 2.6e-33 146.0 155 52.3
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 3.4e-33 145.6 112 61.6
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 4.4e-33 145.2 157 49.0
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 5.7e-33 144.8 148 49.3
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 7.5e-33 144.4 100 67.0
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.3e-32 143.7 157 47.1
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 2.2e-32 142.9 97 67.0
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 2.2e-32 142.9 97 67.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 2.2e-32 142.9 97 67.0
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-32 142.9 94 68.1
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-32 142.9 94 68.1
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 2.2e-32 142.9 160 49.4
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.8e-32 142.5 94 68.1
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.8e-32 142.5 90 75.6
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 3.7e-32 142.1 156 49.4
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 2.4e-31 139.4 92 69.6
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.4e-31 139.4 103 64.1
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.4e-31 139.4 103 64.1
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 2.4e-31 139.4 103 63.1
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 2.4e-31 139.4 103 63.1
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 2.4e-31 139.4 94 66.0
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 4.1e-31 138.7 94 68.1
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.1e-31 138.7 94 68.1
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 5.4e-31 138.3 158 48.1
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 5.4e-31 138.3 94 68.1
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 7.0e-31 137.9 94 66.0
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.2e-30 137.1 102 62.7
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.6e-30 136.7 102 62.7
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 2.0e-30 136.3 157 50.3
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 2.0e-30 136.3 94 64.9
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 2.0e-30 136.3 159 47.2
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 3.5e-30 135.6 87 72.4
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.5e-30 135.2 158 48.1
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 4.5e-30 135.2 75 81.3
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 4.5e-30 135.2 94 63.8
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 1.3e-29 133.7 79 73.4
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.7e-29 133.3 87 69.0
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 2.3e-29 132.9 78 76.9
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 5.0e-29 131.7 88 67.0
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 8.6e-29 131.0 137 51.1
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 1.5e-28 130.2 92 73.9
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 3.3e-28 129.0 100 61.0
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 1.6e-27 126.7 149 47.7
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 2.6e-25 119.4 101 57.4
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 3.7e-24 115.5 81 60.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 4.1e-23 112.1 79 57.0
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.2e-22 110.5 110 50.9
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 1.2e-22 110.5 77 58.4
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 2.9e-21 105.9 90 57.8
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 2.5e-20 102.8 117 46.2
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 2.5e-20 102.8 97 53.6
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 2.5e-20 102.8 97 53.6
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.0e-18 97.4 68 64.7
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 3.1e-18 95.9 89 49.4
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 9.5e-12 74.3 70 51.4
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 4.0e-10 68.9 49 61.2


User provided reference genes

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