Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.8e-163 577.4 272 100.0
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 3.8e-74 282.3 239 60.7
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.6e-48 197.2 268 45.9
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 5.8e-38 162.2 223 44.8
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 3.1e-31 139.8 216 38.0
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.5e-27 126.3 234 35.0
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.9e-25 120.6 234 33.3
Cfa007135 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.4e-23 113.6 128 48.4
Haze_21168 Corylus avellana HOM05D008391 ORTHO05D009743 3.1e-23 113.2 184 38.0
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 6.9e-23 112.1 215 34.0
Cfa003685 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.6e-22 110.2 182 38.5
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 4.5e-22 109.4 176 35.8
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.6e-22 108.6 208 34.1
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.9e-22 108.2 187 36.4
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 1.3e-21 107.8 197 37.6
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-21 107.8 197 37.6
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 4.9e-21 105.9 192 36.5
Cfa007250 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-20 104.8 180 35.6
Cfa017030 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-20 104.8 160 35.6
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-20 104.8 197 36.0
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 1.9e-20 104.0 199 32.7
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 1.6e-19 100.9 182 37.9
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-18 97.4 182 35.2
Haze_14976 Corylus avellana HOM05D001643 ORTHO05D001580 3.0e-18 96.7 63 73.0
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.7e-18 95.5 165 37.0
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-17 93.6 120 44.2
Cfa003301 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.6e-17 91.7 166 36.7
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 8.1e-16 88.6 225 33.3
Cfa017076 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-15 87.8 155 34.8
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 9.0e-15 85.1 140 36.4
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-14 84.7 180 30.6
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 7.6e-14 82.0 172 32.0
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 7.6e-14 82.0 156 36.5
Haze_13950 Corylus avellana HOM05D008391 ORTHO05D009743 3.8e-13 79.7 171 33.3
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 6.4e-13 79.0 199 28.6
Cfa017042 Carpinus fangiana HOM05D008391 ORTHO05D009743 8.4e-13 78.6 190 30.0
Cfa016758 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-11 74.7 79 49.4
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 2.1e-11 73.9 125 41.6
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.6e-11 72.8 195 29.7
Haze_13848 Corylus avellana HOM05D008391 ORTHO05D009743 7.9e-11 72.0 125 36.8
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-10 71.2 127 34.6
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 3.9e-10 69.7 132 39.4
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 5.1e-10 69.3 189 27.5
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 5.1e-10 69.3 105 39.0
Cfa005104 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.7e-10 68.9 129 33.3
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-09 68.2 158 31.0
Cfa015317 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.5e-09 67.8 181 30.4
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 1.5e-09 67.8 176 31.8
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 1.9e-09 67.4 105 39.0
Cfa012827 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.3e-09 66.6 129 34.1
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 3.3e-09 66.6 105 38.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 3.3e-09 66.6 138 30.4
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 5.6e-09 65.9 100 38.0
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 5.6e-09 65.9 134 34.3
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 5.6e-09 65.9 105 38.1
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 5.6e-09 65.9 198 29.3
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 5.6e-09 65.9 198 29.3
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 7.4e-09 65.5 121 34.7
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 1.6e-08 64.3 133 31.6
Haze_19940 Corylus avellana HOM05D008391 ORTHO05D009743 2.1e-08 63.9 155 32.9
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 2.1e-08 63.9 157 29.3
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 2.8e-08 63.5 134 34.3
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 2.8e-08 63.5 198 27.8
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 2.8e-08 63.5 127 33.1
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 2.8e-08 63.5 127 33.1
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 6.2e-08 62.4 168 32.1
CiPaw.03G134300 Carya illinoinensis HOM05D000249 ORTHO05D000206 8.1e-08 62.0 92 38.0
Haze_19842 Corylus avellana HOM05D008391 ORTHO05D009743 1.4e-07 61.2 178 25.8
Carub.0007s2189 Capsella rubella HOM05D000249 ORTHO05D000206 1.8e-07 60.8 185 27.0
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-07 60.5 132 34.1
C01p00590 Brassica napus HOM05D000249 ORTHO05D000206 5.3e-07 59.3 117 33.3
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.3e-07 59.3 85 40.0
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 6.9e-07 58.9 155 30.3
C03p78240 Brassica napus HOM05D000249 ORTHO05D000206 9.0e-07 58.5 143 28.7
BolC3t20082H Brassica oleracea HOM05D000249 ORTHO05D000206 9.0e-07 58.5 143 28.7
A08p23390 Brassica napus HOM05D000249 ORTHO05D000206 1.2e-06 58.2 141 27.7
BraA08t34293Z Brassica rapa HOM05D000249 ORTHO05D000206 1.2e-06 58.2 141 27.7
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 1.5e-06 57.8 63 44.4
CANSAT01G1486 Cannabis sativa HOM05D000249 ORTHO05D000206 2.0e-06 57.4 92 33.7
Gohir.D06G038800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.6e-06 57.0 144 31.2
Thecc.01G112800 Theobroma cacao HOM05D000249 ORTHO05D000206 2.6e-06 57.0 92 31.5
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 3.4e-06 56.6 124 29.8
AL7G11690 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.5e-06 56.2 95 33.7
Cfa006398 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.5e-06 56.2 33 75.8
Haze_24274 Corylus avellana HOM05D008391 ORTHO05D009743 4.5e-06 56.2 89 38.2
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-06 56.2 95 30.5
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 7.6e-06 55.5 179 27.9
AL6G47530 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.0e-05 55.1 89 34.8
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.0e-05 55.1 142 30.3


User provided reference genes

Program Settings