Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007535 Carpinus fangiana HOM05D008650 ORTHO05D009849 3.3e-69 265.0 143 100.0
Haze_14552 Corylus avellana HOM05D008650 ORTHO05D009849 1.3e-41 173.3 97 92.8
CiPaw.03G028200 Carya illinoinensis HOM05D008650 ORTHO05D009849 1.2e-29 133.7 144 58.3
QL02p081554 Quercus lobata HOM05D008650 ORTHO05D009849 3.0e-17 92.4 134 52.2
Manes.15G175100 Manihot esculenta HOM05D008650 ORTHO05D009849 2.1e-15 86.3 151 41.1
Manes.17G025188 Manihot esculenta HOM05D008650 ORTHO05D009849 4.7e-15 85.1 147 42.9
Dinv33746 Davidia involucrata HOM05D008650 ORTHO05D009849 6.8e-14 81.3 168 36.9
TAR629G3297 Trochodendron aralioides HOM05D008650 ORTHO05D009849 8.9e-14 80.9 141 41.1
Cpa.g.sc14.11 Carica papaya HOM05D008650 ORTHO05D009849 7.5e-13 77.8 154 42.9
Prupe.3G269200 Prunus persica HOM05D008650 ORTHO05D009849 3.7e-12 75.5 141 38.3
FAN02G1277 Fragaria x ananassa HOM05D008650 ORTHO05D009849 6.0e-10 68.2 106 44.3
CANSAT64G2373 Cannabis sativa HOM05D008650 ORTHO05D009849 1.3e-09 67.0 114 42.1
FvH4_6g48930 Fragaria vesca HOM05D008650 ORTHO05D009849 1.3e-09 67.0 106 43.4
Nn4g23110 Nelumbo nucifera HOM05D008650 ORTHO05D009849 3.0e-09 65.9 147 36.7
TWI34G0231 Tripterygium wilfordii HOM05D008650 ORTHO05D009849 3.9e-09 65.5 99 47.5
Actinidia06084 Actinidia chinensis HOM05D008650 ORTHO05D009849 5.1e-09 65.1 102 42.2
FAN09G0348 Fragaria x ananassa HOM05D008650 ORTHO05D009849 6.6e-09 64.7 106 43.4
FAN05G5809 Fragaria x ananassa HOM05D008650 ORTHO05D009849 8.6e-09 64.3 94 42.6
Potri.017G080900 Populus trichocarpa HOM05D008650 ORTHO05D009849 8.6e-09 64.3 92 45.7
MELO3C009881.2 Cucumis melo HOM05D008650 ORTHO05D009849 1.1e-08 63.9 149 34.9
MBI05_g00382_MAGBIO Magnolia biondii HOM05D008650 ORTHO05D009849 1.1e-08 63.9 135 37.8
MD17G1049800 Malus domestica HOM05D008650 ORTHO05D009849 2.5e-08 62.8 108 41.7
Sed0028002 Sechium edule HOM05D008650 ORTHO05D009849 2.5e-08 62.8 128 39.1
ClCG10G014960 Citrullus lanatus HOM05D008650 ORTHO05D009849 5.6e-08 61.6 109 39.4
CsaV3_3G041560 Cucumis sativus L. HOM05D008650 ORTHO05D009849 5.6e-08 61.6 114 40.4
TWI32G0557 Tripterygium wilfordii HOM05D008650 ORTHO05D009849 7.3e-08 61.2 149 33.6
FAN14G3064 Fragaria x ananassa HOM05D008650 ORTHO05D009849 9.5e-08 60.8 94 40.4
RcHm_v2.0_Chr2g0168741 Rosa chinensis HOM05D008650 ORTHO05D009849 1.2e-07 60.5 156 34.6
Eucgr.I01937 Eucalyptus grandis HOM05D008650 ORTHO05D009849 2.1e-07 59.7 159 37.1
Rhsim10G0040300 Rhododendron simsii HOM05D008650 ORTHO05D009849 2.1e-07 59.7 100 41.0
Thecc.04G079600 Theobroma cacao HOM05D015048 ORTHO05D009849 2.1e-07 59.7 100 50.0
MD09G1049600 Malus domestica HOM05D008650 ORTHO05D009849 3.6e-07 58.9 138 37.0
Nn6g35259 Nelumbo nucifera HOM05D008650 ORTHO05D009849 3.6e-07 58.9 80 41.2
Actinidia02714 Actinidia chinensis HOM05D008650 ORTHO05D009849 4.7e-07 58.5 71 47.9
Gorai.006G021400 Gossypium raimondii HOM05D015048 ORTHO05D009849 4.7e-07 58.5 128 38.3
TAR371G0968 Trochodendron aralioides HOM05D008650 ORTHO05D009849 6.2e-07 58.2 127 33.9
SHI25492 Sapria himalayana HOM05D008650 ORTHO05D009849 1.1e-06 57.4 87 36.8
Nn2g11434 Nelumbo nucifera HOM05D008650 ORTHO05D009849 1.4e-06 57.0 80 40.0
Gohir.D09G018200 Gossypium hirsutum HOM05D015048 ORTHO05D009849 1.8e-06 56.6 128 38.3
Nn1g02576 Nelumbo nucifera HOM05D008650 ORTHO05D009849 2.4e-06 56.2 80 41.2
Peaxi162Scf00129g00024 Petunia axillaris HOM05D025342 ORTHO05D009849 4.0e-06 55.5 94 36.2
Ciclev10013107m.g Citrus clementina HOM05D008650 ORTHO05D009849 6.8e-06 54.7 97 36.1
TAR371G0038 Trochodendron aralioides HOM05D008650 ORTHO05D009849 8.9e-06 54.3 90 37.8


User provided reference genes

Program Settings