Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007493 Carpinus fangiana HOM05D004965 ORTHO05D004401 3.1e-53 211.5 101 100.0
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 1.6e-38 162.5 84 91.7
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 2.2e-27 125.6 96 65.6
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 3.8e-27 124.8 96 66.7
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.1e-23 113.2 92 63.0
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 9.1e-21 103.6 84 58.3
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 1.5e-20 102.8 84 58.3
Ciclev10013642m.g Citrus clementina HOM05D004965 ORTHO05D004401 7.7e-20 100.5 85 60.0
MD17G1044000 Malus domestica HOM05D004965 ORTHO05D004401 3.2e-18 95.1 84 58.3
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 7.2e-18 94.0 85 56.5
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 7.2e-18 94.0 85 55.3
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 6.1e-17 90.9 98 53.1
RcHm_v2.0_Chr2g0169701 Rosa chinensis HOM05D004965 ORTHO05D004401 7.9e-17 90.5 84 58.3
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 1.0e-16 90.1 85 58.8
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 1.0e-16 90.1 87 54.0
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.9e-16 88.2 85 54.1
vmacro05780 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 3.9e-16 88.2 88 55.7
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 6.7e-16 87.4 84 53.6
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.1e-15 86.7 80 56.2
FvH4_6g49680 Fragaria vesca HOM05D004965 ORTHO05D004401 1.5e-15 86.3 84 56.0
FAN09G1906 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.5e-15 86.3 84 56.0
Sabra17G0067000 Salix brachista HOM05D004965 ORTHO05D004401 3.3e-15 85.1 84 53.6
FAN14G2761 Fragaria x ananassa HOM05D004965 ORTHO05D004401 4.4e-15 84.7 84 54.8
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 4.4e-15 84.7 85 50.6
FAN02G2636 Fragaria x ananassa HOM05D004965 ORTHO05D004401 7.4e-15 84.0 84 54.8
FAN05G5108 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.3e-14 83.2 84 54.8
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 3.7e-14 81.6 84 47.6
Sed0027722 Sechium edule HOM05D004965 ORTHO05D004401 6.3e-14 80.9 85 51.8
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 1.1e-13 80.1 84 48.8
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.4e-13 79.7 84 50.0
Rhsim10G0029300 Rhododendron simsii HOM05D004965 ORTHO05D004401 1.8e-13 79.3 84 51.2
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.8e-13 79.3 85 51.8
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 4.1e-13 78.2 69 53.6
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.5e-12 75.1 97 47.4
Lj2g0009068 Lotus japonicus HOM05D004965 ORTHO05D004401 1.0e-11 73.6 82 47.6
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 2.2e-11 72.4 87 44.8
CSS0014777 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 5.0e-11 71.2 86 45.3
TWI12G0653 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 8.5e-11 70.5 90 50.0
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.5e-10 69.7 89 49.4
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.9e-10 69.3 83 49.4
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 1.9e-10 69.3 89 50.6
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.9e-10 69.3 87 49.4
Eucgr.J02154 Eucalyptus grandis HOM05D004965 ORTHO05D004401 5.5e-10 67.8 79 44.3
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 9.4e-10 67.0 93 43.0
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 9.4e-10 67.0 77 51.9
Glyma.13G067000 Glycine max HOM05D004965 ORTHO05D004401 1.2e-09 66.6 76 48.7
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 2.1e-09 65.9 84 45.2
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.1e-09 65.9 83 45.8
Phvul.004G023800 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 2.1e-09 65.9 86 47.7
AL5G18080 Arabidopsis lyrata HOM05D009946 ORTHO05D004401 2.7e-09 65.5 93 46.2
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 2.7e-09 65.5 84 42.9
Glyma.19G017400 Glycine max HOM05D004965 ORTHO05D004401 2.7e-09 65.5 76 47.4
Carub.0005s0698 Capsella rubella HOM05D009946 ORTHO05D004401 3.6e-09 65.1 81 46.9
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.6e-09 65.1 85 45.9
Thhalv10005220m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 1.0e-08 63.5 98 43.9
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 1.0e-08 63.5 87 47.1
Sp2g17220 Schrenkiella parvula HOM05D009946 ORTHO05D004401 1.0e-08 63.5 81 48.1
Lalb_Chr06g0176581 Lupinus albus HOM05D004965 ORTHO05D004401 1.4e-08 63.2 83 48.2
CARHR292510 Cardamine hirsuta HOM05D009946 ORTHO05D004401 2.3e-08 62.4 81 45.7
DCAR_025362 Daucus carota HOM05D004965 ORTHO05D004401 2.3e-08 62.4 84 41.7
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.3e-08 62.4 99 41.4
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.3e-08 62.4 85 44.7
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 2.3e-08 62.4 85 44.7
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 3.0e-08 62.0 88 44.3
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 3.0e-08 62.0 83 48.2
Manes.01G193600 Manihot esculenta HOM05D004965 ORTHO05D004401 4.0e-08 61.6 86 41.9
AT3G28455 Arabidopsis thaliana HOM05D009946 ORTHO05D004401 8.8e-08 60.5 81 45.7
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 8.8e-08 60.5 96 43.8
Psat1g077560 Pisum sativum HOM05D004965 ORTHO05D004401 8.8e-08 60.5 85 42.4
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.1e-07 60.1 82 45.1
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 1.5e-07 59.7 84 41.7
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 2.0e-07 59.3 102 40.2
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 2.0e-07 59.3 87 46.0
Lju41A28T116 Lonicera japonica HOM05D004965 ORTHO05D004401 2.6e-07 58.9 84 41.7
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 2.6e-07 58.9 77 45.5
Aa31LG2G4620 Aethionema arabicum HOM05D009946 ORTHO05D004401 3.3e-07 58.5 81 44.4
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 3.3e-07 58.5 74 44.6
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 3.3e-07 58.5 85 40.0
MSTRG.2369 Avicennia marina HOM05D004965 ORTHO05D004401 5.7e-07 57.8 99 39.4
BcaB04g19463 Brassica carinata HOM05D009946 ORTHO05D004401 5.7e-07 57.8 85 43.5
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 5.7e-07 57.8 93 43.0
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 5.7e-07 57.8 96 39.6
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 9.7e-07 57.0 75 42.7
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 9.7e-07 57.0 76 42.1
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 9.7e-07 57.0 78 44.9
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 1.3e-06 56.6 79 39.2
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 1.3e-06 56.6 74 43.2
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 1.3e-06 56.6 84 44.0
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 1.7e-06 56.2 100 37.0
A09p03680 Brassica napus HOM05D009946 ORTHO05D004401 2.8e-06 55.5 98 41.8
Cc07_g02840 Coffea canephora HOM05D004965 ORTHO05D004401 2.8e-06 55.5 87 41.4
FAN17G0917 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.8e-06 55.5 61 39.3
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 3.7e-06 55.1 79 40.5
Hund13292 Selenicereus undatus HOM05D004965 ORTHO05D004401 3.7e-06 55.1 94 40.4
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 3.7e-06 55.1 96 32.3
Thhalv10028314m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 4.8e-06 54.7 71 43.7
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 4.8e-06 54.7 71 42.3
Lalb_Chr21g0319141 Lupinus albus HOM05D004965 ORTHO05D004401 4.8e-06 54.7 85 40.0
C09p03880 Brassica napus HOM05D009946 ORTHO05D004401 6.3e-06 54.3 98 40.8
BolC9t53314H Brassica oleracea HOM05D009946 ORTHO05D004401 6.3e-06 54.3 98 40.8
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 6.3e-06 54.3 99 39.4


User provided reference genes

Program Settings