Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 2.9e-152 542.0 295 100.0
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.1e-151 540.0 295 95.6
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.4e-125 453.4 297 79.1
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 2.0e-116 422.9 295 74.2
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 4.5e-113 411.8 266 75.2
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 4.5e-113 411.8 270 73.7
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.0e-108 396.4 268 74.3
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 2.0e-108 396.4 269 72.9
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 2.6e-108 396.0 271 72.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 2.6e-108 396.0 268 71.6
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 9.8e-108 394.0 270 71.9
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 9.2e-106 387.5 272 70.6
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 9.2e-106 387.5 303 67.3
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 3.5e-105 385.6 273 71.8
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.6e-105 385.2 270 70.0
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 6.0e-105 384.8 295 67.5
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 6.0e-105 384.8 267 71.5
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.0e-104 384.0 270 69.6
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.3e-104 383.6 265 68.7
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 3.0e-104 382.5 270 69.6
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.9e-104 382.1 271 69.4
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 3.6e-102 375.6 277 70.0
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 3.6e-102 375.6 277 70.0
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.4e-101 373.6 277 69.7
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 2.3e-101 372.9 292 64.4
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 5.2e-101 371.7 278 66.9
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 4.4e-100 368.6 288 67.4
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 9.8e-100 367.5 304 62.2
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.7e-99 366.7 267 69.7
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 3.7e-99 365.5 267 70.0
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 6.4e-99 364.8 265 70.9
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 6.4e-99 364.8 265 70.9
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 2.4e-98 362.8 271 69.7
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 3.2e-98 362.5 297 66.0
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.7e-97 359.4 271 66.4
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.3e-96 357.1 267 66.7
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 5.1e-96 355.1 264 66.7
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 6.6e-96 354.8 268 68.3
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 8.6e-96 354.4 269 66.9
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.5e-95 353.6 240 72.5
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 4.3e-95 352.1 297 61.3
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.2e-94 350.5 269 66.2
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.8e-94 349.4 293 61.4
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 3.6e-94 349.0 268 66.0
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 3.6e-94 349.0 258 69.8
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 1.1e-93 347.4 230 74.8
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.1e-93 347.4 231 74.0
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.4e-93 347.1 242 71.1
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 2.3e-93 346.3 273 64.8
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 3.1e-93 345.9 268 64.6
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 4.0e-93 345.5 258 66.7
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 4.0e-93 345.5 270 66.7
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 5.2e-93 345.1 268 64.9
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 8.9e-93 344.4 270 66.7
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.2e-92 344.0 252 69.4
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 3.4e-92 342.4 264 64.4
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 3.4e-92 342.4 264 64.4
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 3.4e-92 342.4 264 64.4
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 9.9e-92 340.9 232 70.3
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 9.9e-92 340.9 266 66.5
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 2.9e-91 339.3 266 66.5
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 3.7e-91 339.0 232 69.8
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 3.7e-91 339.0 232 69.8
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.4e-90 337.0 269 63.6
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.4e-90 337.0 238 68.1
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 2.4e-90 336.3 268 64.2
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 2.4e-90 336.3 233 70.4
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 4.1e-90 335.5 233 70.0
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 5.4e-90 335.1 263 64.6
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 7.1e-90 334.7 233 69.5
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 7.1e-90 334.7 272 62.5
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 9.2e-90 334.3 262 64.5
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.6e-89 333.6 268 63.4
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 2.1e-89 333.2 237 69.2
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 3.5e-89 332.4 281 59.1
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 7.8e-89 331.3 281 60.5
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.0e-88 330.9 232 68.1
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 1.3e-88 330.5 305 57.4
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.3e-88 330.5 249 63.5
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.7e-88 330.1 263 64.3
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.5e-87 327.0 235 68.5
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 4.3e-87 325.5 232 68.1
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 9.5e-87 324.3 236 67.4
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 9.5e-87 324.3 226 70.4
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 9.5e-87 324.3 226 70.4
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 2.1e-86 323.2 260 62.7
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 3.6e-86 322.4 236 66.1
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 4.7e-86 322.0 236 66.1
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 3.1e-85 319.3 222 70.3
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.2e-84 317.4 261 62.8
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 1.5e-84 317.0 236 64.4
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 2.6e-84 316.2 247 64.4
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 2.2e-83 313.2 230 66.5
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 5.4e-82 308.5 230 66.5
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.3e-80 303.9 222 67.1
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 3.0e-80 302.8 259 61.8
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 1.2e-78 297.4 247 62.3
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 2.5e-71 273.1 182 74.7
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 4.3e-71 272.3 221 63.3
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.1e-69 267.7 242 59.1
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.8e-61 240.4 260 51.2
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 5.3e-61 238.8 165 69.7
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 4.5e-60 235.7 294 46.9
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 8.4e-51 204.9 207 51.7
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 6.1e-49 198.7 141 66.7
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-47 194.5 129 69.8
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 2.8e-46 189.9 201 48.8
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.4e-44 183.0 202 50.0
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 5.9e-44 182.2 151 58.3
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 6.5e-43 178.7 213 43.7
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 2.1e-41 173.7 196 45.4
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.3e-40 170.2 141 61.7
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.3e-38 164.5 199 42.2
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 3.6e-33 146.4 87 75.9
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 3.3e-31 139.8 129 55.8
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 3.2e-26 123.2 91 67.0
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 1.1e-23 114.8 106 56.6
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 2.2e-22 110.5 87 62.1
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 7.0e-21 105.5 93 54.8
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.1e-18 98.2 71 66.2
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 4.7e-17 92.8 60 70.0
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 4.4e-15 86.3 219 28.8
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 6.3e-14 82.4 63 65.1
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 6.8e-08 62.4 34 85.3


User provided reference genes

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