Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 7.4e-65 250.4 125 100.0
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 3.1e-63 245.0 124 98.4
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.2e-59 233.0 124 91.1
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.2e-59 233.0 124 91.1
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 2.6e-57 225.3 125 88.8
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.9e-53 211.8 125 82.4
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.9e-53 211.8 125 82.4
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 2.9e-53 211.8 125 82.4
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 3.2e-52 208.4 125 80.8
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 4.2e-52 208.0 125 81.6
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 1.2e-51 206.5 118 83.1
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 2.1e-51 205.7 123 81.3
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 3.6e-51 204.9 118 83.9
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 4.7e-51 204.5 125 78.4
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 4.7e-51 204.5 125 80.8
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 1.0e-50 203.4 125 78.4
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.0e-50 203.4 125 78.4
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.3e-50 202.2 125 77.6
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.0e-50 201.4 118 83.1
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 8.8e-50 200.3 120 77.5
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 2.0e-49 199.1 123 77.2
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 2.0e-49 199.1 125 76.0
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 2.6e-49 198.7 125 77.6
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 7.5e-49 197.2 125 72.8
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 1.3e-48 196.4 123 77.2
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 1.3e-48 196.4 125 76.0
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 2.8e-48 195.3 123 74.8
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 6.3e-48 194.1 123 74.8
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 6.3e-48 194.1 123 77.2
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.4e-47 193.0 118 80.5
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 3.1e-47 191.8 118 77.1
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 4.1e-47 191.4 125 71.2
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 7.0e-47 190.7 125 78.4
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 7.0e-47 190.7 118 78.0
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 7.0e-47 190.7 125 71.2
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 7.0e-47 190.7 125 73.6
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-46 189.5 125 73.6
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 1.6e-46 189.5 125 73.6
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.6e-46 189.5 123 75.6
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.6e-46 189.5 125 73.6
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 2.0e-46 189.1 125 72.0
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.0e-46 189.1 125 71.2
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 2.0e-46 189.1 118 78.0
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.0e-46 189.1 118 78.0
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.0e-46 189.1 125 71.2
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 2.7e-46 188.7 125 73.6
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 3.5e-46 188.3 125 71.2
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 4.5e-46 188.0 123 71.5
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.9e-46 187.6 118 77.1
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 5.9e-46 187.6 117 77.8
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.0e-45 186.8 124 70.2
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.3e-45 186.4 125 72.0
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 1.3e-45 186.4 142 68.3
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.3e-45 186.4 123 69.9
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.7e-45 186.0 125 72.8
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 1.7e-45 186.0 118 75.4
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.7e-45 186.0 125 72.8
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 2.2e-45 185.7 125 67.2
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 2.9e-45 185.3 125 72.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 2.9e-45 185.3 120 77.5
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 2.9e-45 185.3 118 74.6
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 2.9e-45 185.3 123 75.6
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 3.8e-45 184.9 125 72.8
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 3.8e-45 184.9 125 71.2
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 5.0e-45 184.5 125 71.2
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 5.0e-45 184.5 123 69.9
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 6.5e-45 184.1 125 71.2
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 6.5e-45 184.1 125 71.2
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 6.5e-45 184.1 125 71.2
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 6.5e-45 184.1 125 71.2
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.5e-45 184.1 116 77.6
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 8.5e-45 183.7 120 76.7
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 8.5e-45 183.7 125 71.2
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 8.5e-45 183.7 125 71.2
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 8.5e-45 183.7 125 71.2
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.5e-44 182.2 117 75.2
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 3.2e-44 181.8 120 75.8
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 2.1e-43 179.1 122 71.3
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 3.6e-43 178.3 120 74.2
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 6.1e-43 177.6 105 80.0
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 6.1e-43 177.6 120 70.8
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 1.0e-42 176.8 120 70.0
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.4e-42 176.4 147 59.9
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.4e-42 176.4 124 69.4
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.8e-42 176.0 121 72.7
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.0e-42 175.3 111 74.8
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 4.0e-42 174.9 120 71.7
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 8.8e-42 173.7 117 70.1
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 1.2e-41 173.3 122 68.9
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 1.5e-41 172.9 119 68.1
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 4.4e-41 171.4 145 59.3
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.7e-41 171.0 106 78.3
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 2.2e-40 169.1 107 76.6
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.8e-40 168.7 137 65.0
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 2.8e-40 168.7 105 75.2
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 3.7e-40 168.3 122 73.0
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-38 162.9 101 75.2
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 2.7e-38 162.2 113 69.0
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 2.7e-38 162.2 123 67.5
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 2.7e-38 162.2 118 65.3
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 5.9e-38 161.0 128 64.8
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 5.9e-38 161.0 113 68.1
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 3.8e-37 158.3 101 73.3
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 5.0e-37 157.9 217 44.2
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.9e-36 156.0 130 63.8
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 2.3e-34 149.1 95 75.8
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 3.0e-34 148.7 127 57.5
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 6.8e-34 147.5 118 61.0
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 8.9e-34 147.1 125 60.8
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 2.0e-33 146.0 88 78.4
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.4e-31 139.0 107 64.5
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 4.1e-31 138.3 101 63.4
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 4.3e-28 128.3 104 61.5
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 5.6e-28 127.9 81 77.8
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 4.7e-27 124.8 120 59.2
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 1.8e-26 122.9 68 79.4
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 4.4e-25 118.2 128 47.7
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 3.7e-24 115.2 74 75.7
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 8.3e-24 114.0 69 71.0
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 7.8e-22 107.5 74 66.2
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 1.3e-21 106.7 86 55.8
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 3.0e-21 105.5 182 39.0
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 6.6e-21 104.4 90 61.1
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.8e-19 99.0 70 67.1
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 8.9e-18 94.0 121 38.0
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 1.2e-17 93.6 61 73.8
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 2.1e-14 82.8 52 73.1
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 1.1e-12 77.0 131 39.7
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 3.3e-12 75.5 47 70.2
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.1e-07 60.5 106 34.9


User provided reference genes

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