Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 8.7e-148 526.9 266 100.0
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.9e-94 349.7 240 72.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 4.9e-90 335.1 225 74.7
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.1e-89 334.0 211 79.1
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.9e-89 333.2 225 74.2
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.7e-82 308.9 240 67.1
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 5.2e-68 261.9 165 86.1
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.2e-67 260.8 152 91.4
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 1.0e-63 247.7 229 58.1
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 3.0e-63 246.1 225 60.0
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.0e-59 233.4 220 59.1
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 5.8e-59 231.9 227 55.9
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.9e-57 226.9 222 54.1
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.1e-52 211.1 231 47.6
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.8e-52 210.3 203 59.1
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 9.0e-52 208.0 217 51.6
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 2.6e-51 206.5 217 51.2
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 5.8e-51 205.3 217 50.7
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 7.6e-51 204.9 230 50.4
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 4.9e-50 202.2 218 49.5
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.9e-49 200.3 217 48.8
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 4.6e-48 195.7 225 48.9
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 8.7e-47 191.4 179 54.7
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 1.9e-46 190.3 217 49.3
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.9e-46 190.3 228 47.8
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.5e-46 189.9 219 50.2
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 3.3e-46 189.5 217 46.1
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.4e-44 184.1 225 49.8
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 3.1e-44 183.0 184 56.0
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 3.1e-44 183.0 184 56.0
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 4.0e-44 182.6 229 46.3
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.2e-43 181.0 181 50.3
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.6e-43 179.9 225 48.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.0e-42 177.9 186 51.6
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 6.5e-42 175.3 228 46.1
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.2e-41 172.6 202 46.0
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 2.3e-39 166.8 217 47.0
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 3.3e-38 162.9 209 46.4
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 4.3e-38 162.5 217 44.2
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.7e-38 162.2 258 38.8
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 8.2e-37 158.3 203 48.3
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 8.2e-37 158.3 187 46.5
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.1e-36 157.9 181 48.1
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 2.6e-35 153.3 216 44.4
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 3.4e-35 152.9 226 40.7
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 7.2e-33 145.2 210 43.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 3.6e-32 142.9 202 43.6
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.0e-31 141.4 211 41.7
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 2.3e-31 140.2 241 36.5
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.3e-29 134.4 209 38.8
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 8.2e-29 131.7 127 52.0
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.3e-26 124.4 150 45.3
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.1e-24 117.1 183 38.8
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.6e-22 110.2 118 50.0
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 3.3e-22 109.8 228 35.5
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 3.3e-22 109.8 225 36.9
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 3.3e-22 109.8 225 36.9
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.1e-20 104.8 136 47.1
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 4.1e-20 102.8 162 40.7
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.2e-18 97.1 194 36.1
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.1e-17 94.7 152 42.1
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 4.7e-16 89.4 115 45.2
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 4.5e-11 72.8 112 36.6
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 1.6e-08 64.3 144 33.3
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 3.0e-07 60.1 41 61.0
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 4.4e-06 56.2 67 43.3


User provided reference genes

Program Settings