Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 0.0e+00 10540.6 5842 100.0
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 0.0e+00 7134.3 6504 68.5
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 0.0e+00 2334.3 7913 33.8
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 3.6e-246 858.2 2603 35.2
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 2.1e-137 496.9 3503 27.1
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 3.7e-89 336.7 4612 24.9
Ciclev10014006m.g Citrus clementina HOM05D018456 ORTHO05D012260 9.7e-82 312.0 3792 25.1
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 2.5e-77 297.4 2932 25.2
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 1.4e-64 255.0 4590 23.7
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 3.5e-63 250.4 2085 25.0
Sabra16G0224300 Salix brachista HOM05D013434 ORTHO05D014659 6.5e-62 246.1 4174 25.3
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 4.1e-56 226.9 4496 24.0
TAR622G0299 Trochodendron aralioides HOM05D008944 ORTHO05D012715 5.0e-38 166.8 2905 23.9
TWI36G0429 Tripterygium wilfordii HOM05D013434 ORTHO05D014659 2.5e-37 164.5 3032 22.8
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 4.3e-37 163.7 537 34.8
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 7.5e-34 152.9 4627 22.3
Duzib187G0676 Durio zibethinus HOM05D010821 ORTHO05D012260 5.4e-32 146.7 1478 25.5
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 7.1e-32 146.4 2955 23.4
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 3.5e-31 144.1 242 43.8
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 3.5e-31 144.1 431 35.3
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 1.5e-29 138.7 2341 24.8
TAR374G0977 Trochodendron aralioides HOM05D008944 ORTHO05D012715 7.3e-29 136.3 485 30.5
CiPaw.03G043500 Carya illinoinensis HOM05D018456 ORTHO05D024862 1.3e-25 125.6 866 26.6
FAN14G4966 Fragaria x ananassa HOM05D011862 ORTHO05D014222 4.9e-25 123.6 4407 22.6
vmacro05865 Vaccinium macrocarpon HOM05D008944 ORTHO05D017205 3.2e-24 120.9 1868 23.2
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 7.8e-23 116.3 1343 24.9
COL.COLO4_29109 Corchorus olitorius HOM05D010821 ORTHO05D012260 2.3e-22 114.8 1847 24.1
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 4.3e-21 110.5 1411 25.7
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 2.6e-18 101.3 115 54.8
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 2.4e-16 94.7 258 32.2
FvH4_6g51240 Fragaria vesca HOM05D011862 ORTHO05D014222 7.1e-16 93.2 4515 23.1
GSVIVG01032410001 Vitis vinifera HOM05D008944 ORTHO05D012715 1.6e-15 92.0 1647 23.0
Manes.17G112400 Manihot esculenta HOM05D013434 ORTHO05D014659 5.1e-14 87.0 4111 22.4
Actinidia05998 Actinidia chinensis HOM05D008944 ORTHO05D017205 1.9e-13 85.1 833 25.3
FAN02G2635 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.9e-13 85.1 4476 22.3
CAN.G473.9 Capsicum annuum HOM05D012441 ORTHO05D013726 5.6e-13 83.6 244 29.5
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 1.3e-12 82.4 496 27.4
FAN09G0781 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.6e-12 82.0 4424 22.8
Gohir.A05G355900 Gossypium hirsutum HOM05D010821 ORTHO05D012260 6.9e-11 76.6 1635 23.2
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 1.2e-10 75.9 484 26.4
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 2.6e-10 74.7 498 26.1
Actinidia36113 Actinidia chinensis HOM05D008944 ORTHO05D017205 7.1e-08 66.6 1683 23.5
Gorai.012G064000 Gossypium raimondii HOM05D010821 ORTHO05D012260 1.3e-06 62.4 1688 23.0


User provided reference genes

Program Settings