Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.4e-182 642.9 329 100.0
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.6e-170 602.1 314 96.8
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 4.5e-146 521.5 340 80.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 9.5e-144 513.8 346 78.0
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.0e-141 506.1 330 78.8
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 7.0e-139 497.7 333 78.7
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 8.9e-134 480.7 338 75.4
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.2e-133 480.3 342 73.4
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.5e-133 479.9 336 74.1
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 5.8e-133 478.0 336 73.5
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.3e-132 476.9 343 75.5
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 3.7e-132 475.3 332 75.3
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 4.9e-132 474.9 343 74.3
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.4e-132 474.6 340 73.2
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 8.3e-132 474.2 332 73.8
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.3e-132 474.2 338 72.8
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 1.1e-131 473.8 340 72.6
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.2e-130 470.3 340 72.1
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.7e-130 469.2 339 72.3
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 4.6e-130 468.4 338 73.4
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.3e-129 466.8 336 72.6
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.3e-129 466.8 340 73.5
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 1.3e-129 466.8 349 71.6
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 6.6e-129 464.5 330 74.5
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 8.6e-129 464.2 334 72.8
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.5e-128 462.6 338 72.5
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 9.5e-128 460.7 330 73.3
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 6.2e-127 458.0 336 71.1
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.8e-126 456.4 330 71.2
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 5.2e-126 454.9 330 72.4
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 6.8e-126 454.5 333 71.2
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.2e-125 453.8 339 71.4
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.5e-125 453.4 321 72.9
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 2.0e-125 453.0 311 75.6
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.4e-125 452.2 343 70.0
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 3.4e-125 452.2 328 72.6
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 4.4e-125 451.8 334 71.6
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 9.9e-125 450.7 330 71.5
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.3e-124 450.3 276 81.2
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-124 450.3 338 71.3
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 2.2e-124 449.5 330 71.2
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 2.9e-124 449.1 333 71.8
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.1e-123 447.2 325 72.9
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.9e-123 446.4 336 68.5
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.1e-123 444.5 324 72.5
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 9.2e-123 444.1 341 71.0
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 9.2e-123 444.1 330 70.6
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 6.0e-122 441.4 338 70.7
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.7e-121 439.9 321 71.7
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 5.1e-121 438.3 338 70.1
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 6.6e-121 438.0 340 67.6
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 3.3e-120 435.6 339 68.4
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 5.6e-120 434.9 327 69.1
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 5.6e-120 434.9 348 67.0
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 9.5e-120 434.1 339 67.3
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 1.2e-119 433.7 338 68.3
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 2.8e-119 432.6 327 67.6
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 2.8e-119 432.6 344 66.6
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 3.6e-119 432.2 336 68.8
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.6e-119 432.2 348 66.7
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.2e-117 427.2 272 77.9
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.2e-117 427.2 326 68.7
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 2.0e-117 426.4 328 68.6
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 2.6e-117 426.0 338 66.3
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 2.6e-117 426.0 342 67.0
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 9.9e-117 424.1 337 68.5
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 2.9e-116 422.5 332 65.4
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 3.8e-116 422.2 335 65.7
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 3.8e-116 422.2 344 64.0
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 6.4e-116 421.4 330 67.3
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.9e-115 419.9 250 80.0
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 4.1e-115 418.7 326 67.8
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 4.1e-115 418.7 330 66.7
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 5.4e-115 418.3 272 76.1
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 9.2e-115 417.5 252 79.8
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.7e-114 416.0 297 70.0
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 2.7e-114 416.0 337 65.6
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 6.0e-114 414.8 250 79.2
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.0e-113 414.1 390 60.8
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.0e-113 414.1 250 80.4
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.3e-113 413.7 326 67.8
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.7e-113 413.3 252 79.0
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 5.1e-113 411.8 331 64.7
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 6.6e-113 411.4 329 65.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.3e-112 409.1 291 71.5
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 9.6e-112 407.5 305 69.5
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 9.6e-112 407.5 315 67.9
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 9.6e-112 407.5 305 69.5
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.1e-111 406.4 312 68.3
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.1e-111 406.4 416 57.5
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 2.8e-111 406.0 332 65.1
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 2.8e-111 406.0 315 67.6
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 8.1e-111 404.4 331 64.0
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 6.9e-110 401.4 301 69.4
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 2.9e-108 396.0 299 70.6
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.1e-107 394.0 273 70.7
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.1e-107 394.0 274 71.2
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 7.1e-107 391.3 339 61.9
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 9.3e-107 391.0 297 67.3
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.7e-106 389.4 260 72.7
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.1e-104 384.0 332 61.1
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 4.3e-104 382.1 294 68.7
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.1e-103 379.8 306 63.7
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 3.6e-103 379.0 251 71.3
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 3.1e-102 375.9 349 60.5
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.6e-101 372.9 354 59.6
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 8.7e-97 357.8 294 62.6
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 6.2e-95 351.7 307 61.9
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 2.1e-90 336.7 257 63.0
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 9.0e-86 321.2 324 55.2
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 2.2e-84 316.6 234 70.1
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 3.0e-81 306.2 341 54.0
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 7.4e-80 301.6 330 53.6
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.4e-64 249.2 217 63.6
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.7e-63 247.3 211 64.0
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 8.5e-60 235.0 260 47.3
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 3.2e-59 233.0 236 50.4
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 3.2e-59 233.0 238 49.6
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.2e-59 232.6 210 61.4
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.1e-58 230.3 213 62.4
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 6.1e-58 228.8 150 72.7
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 5.7e-56 222.2 255 44.3
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 9.7e-56 221.5 206 59.7
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.1e-54 216.5 127 83.5
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.1e-54 216.5 127 83.5
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 1.9e-51 207.2 126 80.2
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 2.1e-50 203.8 306 38.9
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.0e-49 201.4 170 63.5
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.7e-47 194.1 109 83.5
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 1.8e-41 174.1 257 37.4
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 4.5e-37 159.5 248 35.9
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.3e-36 157.9 91 87.9
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.0e-33 148.3 104 70.2
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 5.2e-33 146.0 132 60.6
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 4.5e-29 132.9 105 69.5
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 8.6e-28 128.6 215 33.0
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 3.4e-24 116.7 76 75.0
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.1e-22 111.7 65 80.0
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 4.1e-22 109.8 65 78.5
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 9.2e-22 108.6 65 78.5
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 3.0e-20 103.6 113 54.9
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 3.0e-20 103.6 113 54.9
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 8.6e-20 102.1 90 64.4
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 4.3e-19 99.8 81 60.5
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 6.2e-18 95.9 81 66.7
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 2.3e-17 94.0 154 37.7
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 4.4e-16 89.7 110 44.5
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 3.7e-15 86.7 47 83.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 4.9e-15 86.3 52 76.9
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 6.0e-13 79.3 47 78.7
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.0e-12 78.6 158 36.7
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 8.9e-09 65.5 44 70.5
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 4.1e-06 56.6 59 57.6


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