Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 1.9e-104 382.5 193 100.0
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 6.0e-98 360.9 185 97.8
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 2.2e-92 342.4 193 87.6
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 7.9e-90 334.0 213 80.3
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 1.6e-87 326.2 193 79.8
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 4.0e-86 321.6 192 81.2
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 5.3e-86 321.2 193 83.4
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.2e-85 320.1 192 79.7
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.0e-85 319.3 193 79.3
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 4.5e-85 318.2 193 80.8
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 7.6e-85 317.4 193 77.7
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 1.3e-84 316.6 191 78.5
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 1.1e-83 313.5 193 78.2
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 1.9e-83 312.8 192 78.1
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 3.2e-83 312.0 193 78.8
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 4.2e-83 311.6 192 76.0
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 7.1e-83 310.8 193 79.8
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 2.1e-82 309.3 193 77.2
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 6.1e-82 307.8 184 79.9
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 1.8e-81 306.2 191 77.0
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 3.0e-81 305.4 193 75.6
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 3.9e-81 305.1 192 75.5
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 8.7e-81 303.9 191 74.3
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.1e-80 303.5 193 76.7
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 1.5e-80 303.1 193 77.2
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.9e-80 302.8 193 75.6
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 3.3e-80 302.0 235 65.1
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 7.4e-80 300.8 193 77.7
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 7.4e-80 300.8 193 77.7
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 1.6e-79 299.7 191 74.3
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 1.6e-79 299.7 191 73.8
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 2.2e-79 299.3 190 77.9
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 2.2e-79 299.3 154 97.4
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 8.2e-79 297.4 193 75.1
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.1e-78 297.0 194 74.7
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 3.1e-78 295.4 182 77.5
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 6.9e-78 294.3 189 75.1
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 9.0e-78 293.9 191 72.3
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 1.2e-77 293.5 193 75.1
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 1.2e-77 293.5 190 74.2
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.0e-77 292.7 185 74.6
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 4.5e-77 291.6 191 73.3
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 4.5e-77 291.6 191 72.8
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 7.7e-77 290.8 182 75.8
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 7.7e-77 290.8 191 71.7
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.0e-76 290.4 193 74.1
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 1.3e-76 290.0 193 74.6
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 1.7e-76 289.7 189 74.1
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 5.0e-76 288.1 193 69.4
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 2.5e-75 285.8 191 70.7
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 9.4e-75 283.9 193 69.9
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.4e-73 280.0 193 67.9
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 2.3e-73 279.3 186 73.1
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 6.7e-73 277.7 177 78.5
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 1.5e-72 276.6 191 66.5
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.5e-72 276.6 191 67.0
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.5e-72 276.6 191 71.2
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 2.0e-72 276.2 185 70.8
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 3.3e-72 275.4 177 72.3
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 3.3e-72 275.4 189 70.4
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 9.7e-72 273.9 189 67.2
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 2.2e-71 272.7 189 64.0
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 3.7e-71 271.9 175 72.0
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 3.7e-71 271.9 190 66.3
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 4.8e-71 271.6 190 67.4
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 1.4e-70 270.0 193 65.3
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 2.6e-69 265.8 167 76.0
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 3.8e-68 261.9 189 65.6
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.2e-67 258.8 230 61.3
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-66 256.9 164 76.8
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-66 256.9 164 76.8
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 3.6e-66 255.4 160 79.4
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 4.4e-64 248.4 169 68.6
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 9.7e-64 247.3 209 60.3
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.7e-63 246.5 172 69.8
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 2.8e-63 245.7 153 76.5
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 5.3e-62 241.5 154 72.1
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 5.7e-56 221.5 138 76.8
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 9.7e-56 220.7 138 76.8
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 1.0e-52 210.7 207 56.5
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 1.8e-49 199.9 125 76.0
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 4.0e-49 198.7 129 69.8
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.1e-46 190.7 153 65.4
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.5e-43 180.3 131 63.4
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.2e-43 179.1 111 77.5
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 8.8e-41 171.0 208 47.6
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 4.5e-37 158.7 103 71.8
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 2.1e-34 149.8 90 82.2
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 6.8e-33 144.8 134 56.0
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.7e-31 140.2 133 56.4
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 1.6e-29 133.7 79 77.2
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 1.7e-28 130.2 140 54.3
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 9.5e-27 124.4 73 78.1
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 2.1e-26 123.2 189 40.2
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 6.1e-26 121.7 76 76.3
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 5.2e-25 118.6 73 76.7
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 1.4e-22 110.5 190 35.8
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 7.0e-22 108.2 183 35.0
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 9.2e-22 107.8 183 35.0
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.3e-20 103.2 130 39.2
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 3.9e-20 102.4 183 33.3
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 6.2e-18 95.1 60 71.7
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 3.1e-17 92.8 185 34.6
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 7.5e-16 88.2 60 73.3
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 9.8e-16 87.8 75 61.3
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 4.9e-15 85.5 74 60.8
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 1.1e-14 84.3 128 41.4
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 3.5e-13 79.3 174 34.5
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 4.4e-08 62.4 63 52.4
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 5.4e-06 55.5 33 72.7
Migut.L00776 Erythranthe guttata HOM05D006972 ORTHO05D008519 7.1e-06 55.1 28 85.7


User provided reference genes

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