Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007034 Carpinus fangiana HOM05D005999 ORTHO05D003360 2.9e-172 609.0 444 100.0
Haze_03698 Corylus avellana HOM05D005999 ORTHO05D003360 3.6e-162 575.5 444 97.3
CiPaw.08G125500 Carya illinoinensis HOM05D005999 ORTHO05D003360 3.0e-92 343.2 307 61.9
QL06p052235 Quercus lobata HOM05D005999 ORTHO05D003360 6.0e-85 318.9 304 61.5
RcHm_v2.0_Chr2g0098251 Rosa chinensis HOM05D005999 ORTHO05D003360 1.9e-83 313.9 288 61.5
Manes.01G151300 Manihot esculenta HOM05D005999 ORTHO05D003360 2.1e-82 310.5 302 58.3
Prupe.7G175600 Prunus persica HOM05D005999 ORTHO05D003360 4.8e-82 309.3 299 59.9
ClCG01G020640 Citrullus lanatus HOM05D005999 ORTHO05D003360 1.1e-81 308.1 269 59.5
TWI73G0962 Tripterygium wilfordii HOM05D005999 ORTHO05D003360 4.0e-81 306.2 296 58.4
Thecc.01G010800 Theobroma cacao HOM05D005999 ORTHO05D003360 2.2e-79 300.4 305 58.7
CsaV3_6G047550 Cucumis sativus L. HOM05D005999 ORTHO05D003360 2.9e-79 300.1 288 56.2
MD15G1236900 Malus domestica HOM05D005999 ORTHO05D003360 2.9e-79 300.1 287 59.2
Duzib147G0884 Durio zibethinus HOM05D005999 ORTHO05D003360 1.4e-78 297.7 302 57.6
Ciclev10025620m.g Citrus clementina HOM05D005999 ORTHO05D003360 1.6e-77 294.3 290 56.2
Eucgr.I02298 Eucalyptus grandis HOM05D005999 ORTHO05D003360 1.6e-77 294.3 298 58.4
MELO3C007947.2 Cucumis melo HOM05D005999 ORTHO05D003360 2.7e-77 293.5 288 55.6
Duzib187G1063 Durio zibethinus HOM05D005999 ORTHO05D003360 7.9e-77 292.0 292 56.8
Gohir.A02G174800 Gossypium hirsutum HOM05D005999 ORTHO05D003360 1.8e-76 290.8 299 56.5
Gohir.D03G005000 Gossypium hirsutum HOM05D005999 ORTHO05D003360 3.9e-76 289.7 303 56.1
Gorai.003G005300 Gossypium raimondii HOM05D005999 ORTHO05D003360 6.7e-76 288.9 300 56.7
PGR119G0821 Punica granatum HOM05D005999 ORTHO05D003360 8.7e-76 288.5 290 55.9
Sed0006391 Sechium edule HOM05D005999 ORTHO05D003360 8.7e-76 288.5 285 55.8
arahy.Tifrunner.gnm1.ann1.74V199 Arachis hypogaea HOM05D005999 ORTHO05D003360 1.9e-75 287.3 301 54.8
arahy.Tifrunner.gnm1.ann1.JK0YGC Arachis hypogaea HOM05D005999 ORTHO05D003360 1.9e-75 287.3 301 54.8
FAN19G2768 Fragaria x ananassa HOM05D005999 ORTHO05D003360 4.3e-75 286.2 288 57.6
Lalb_Chr05g0212151 Lupinus albus HOM05D005999 ORTHO05D003360 7.4e-75 285.4 296 55.7
THA.LOC104826498 Tarenaya hassleriana HOM05D005999 ORTHO05D003360 2.8e-74 283.5 280 56.1
Lj2g0014093 Lotus japonicus HOM05D005999 ORTHO05D003360 4.8e-74 282.7 295 55.6
GSVIVG01005198001 Vitis vinifera HOM05D005999 ORTHO05D003360 6.3e-74 282.3 444 61.3
Potri.007G060400 Populus trichocarpa HOM05D005999 ORTHO05D003360 1.1e-73 281.6 289 56.1
Potri.005G105800 Populus trichocarpa HOM05D005999 ORTHO05D003360 2.4e-73 280.4 289 56.7
CANSAT25G3254 Cannabis sativa HOM05D005999 ORTHO05D003360 6.9e-73 278.9 302 53.3
Atru.chr3.914 Acer truncatum HOM05D005999 ORTHO05D003360 3.4e-72 276.6 310 51.3
Atru.chr3.919 Acer truncatum HOM05D005999 ORTHO05D003360 3.4e-72 276.6 310 51.3
Dinv08545 Davidia involucrata HOM05D005999 ORTHO05D003360 3.4e-72 276.6 324 52.8
FvH4_1g10990 Fragaria vesca HOM05D005999 ORTHO05D003360 3.4e-72 276.6 288 55.9
TAR628G0133 Trochodendron aralioides HOM05D005999 ORTHO05D003360 1.0e-71 275.0 292 56.5
Sabra05G0086500 Salix brachista HOM05D005999 ORTHO05D003360 2.9e-71 273.5 288 54.5
C09p12060 Brassica napus HOM05D005999 ORTHO05D003360 6.5e-71 272.3 267 53.9
BraA09t36663Z Brassica rapa HOM05D005999 ORTHO05D003360 8.5e-71 271.9 247 55.1
A09p10170 Brassica napus HOM05D005999 ORTHO05D003360 1.4e-70 271.2 295 50.5
BolC9t54096H Brassica oleracea HOM05D005999 ORTHO05D003360 4.2e-70 269.6 269 55.0
Carub.0008s2845 Capsella rubella HOM05D005999 ORTHO05D003360 4.2e-70 269.6 278 51.1
CARHR281700 Cardamine hirsuta HOM05D005999 ORTHO05D003360 4.2e-70 269.6 289 50.9
BcaC04g23109 Brassica carinata HOM05D005999 ORTHO05D003360 3.6e-69 266.5 245 56.3
FAN23G1568 Fragaria x ananassa HOM05D005999 ORTHO05D003360 1.0e-68 265.0 291 53.6
Sc16g0001790 Simmondsia chinensis HOM05D005999 ORTHO05D003360 1.0e-68 265.0 294 51.0
EL10Ac6g13337 Beta vulgaris HOM05D005999 ORTHO05D003360 1.8e-68 264.2 320 48.4
Ca_24948_v3 Cicer arietinum L. HOM05D005999 ORTHO05D003360 3.9e-68 263.1 294 51.4
AT5G66055 Arabidopsis thaliana HOM05D005999 ORTHO05D003360 6.7e-68 262.3 295 49.5
Thhalv10004296m.g Eutrema salsugineum HOM05D005999 ORTHO05D003360 1.1e-67 261.5 291 49.8
Sp2g30630 Schrenkiella parvula HOM05D005999 ORTHO05D003360 1.5e-67 261.2 296 48.3
AL8G45550 Arabidopsis lyrata HOM05D005999 ORTHO05D003360 2.0e-67 260.8 284 50.4
BcaB04g20127 Brassica carinata HOM05D005999 ORTHO05D003360 2.5e-67 260.4 281 51.2
Hma1.2p1_0315F.1_g122640 Hydrangea macrophylla HOM05D005999 ORTHO05D003360 2.2e-66 257.3 330 49.1
Glyma.01G161900 Glycine max HOM05D005999 ORTHO05D003360 1.1e-65 255.0 302 51.3
Phvul.002G104000 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 5.3e-65 252.7 305 51.8
Glyma.11G081800 Glycine max HOM05D005999 ORTHO05D003360 2.6e-64 250.4 306 51.0
Nn6g31889 Nelumbo nucifera HOM05D005999 ORTHO05D003360 4.5e-64 249.6 307 51.8
Cc01_g06010 Coffea canephora HOM05D005999 ORTHO05D003360 1.0e-63 248.4 315 47.6
Medtr5g022050 Medicago truncatula HOM05D005999 ORTHO05D003360 1.3e-63 248.1 288 51.0
Sopen02g012860 Solanum pennellii HOM05D005999 ORTHO05D003360 2.9e-63 246.9 321 48.0
PSO210G1231 Papaver somniferum HOM05D005999 ORTHO05D003360 3.8e-63 246.5 314 50.0
PGSC0003DMG400008679 Solanum tuberosum HOM05D005999 ORTHO05D003360 5.0e-63 246.1 320 47.8
Aa31LG9G1330 Aethionema arabicum HOM05D005999 ORTHO05D003360 1.4e-62 244.6 284 48.6
CSS0035556 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 1.9e-62 244.2 314 47.5
Psat2g151600 Pisum sativum HOM05D005999 ORTHO05D003360 1.9e-62 244.2 291 50.2
Nitab4.5_0005409g0010 Nicotiana tabacum HOM05D005999 ORTHO05D003360 2.5e-62 243.8 320 49.1
Lalb_Chr16g0377331 Lupinus albus HOM05D005999 ORTHO05D003360 3.2e-62 243.4 293 49.1
Lj6A806T47 Lonicera japonica HOM05D005999 ORTHO05D003360 7.2e-62 242.3 315 47.6
Hund16623 Selenicereus undatus HOM05D005999 ORTHO05D003360 1.6e-61 241.1 248 51.2
Nitab4.5_0000188g0250 Nicotiana tabacum HOM05D005999 ORTHO05D003360 2.1e-61 240.7 319 48.0
Solyc02g061820.4 Solanum lycopersicum HOM05D005999 ORTHO05D003360 2.1e-61 240.7 321 47.0
VMungo1215G1128 Vigna mungo HOM05D005999 ORTHO05D003360 2.1e-61 240.7 298 50.0
Actinidia28736 Actinidia chinensis HOM05D005999 ORTHO05D003360 4.7e-61 239.6 312 49.4
PSO170G6629 Papaver somniferum HOM05D005999 ORTHO05D003360 6.1e-61 239.2 313 48.2
CSS0001074 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 1.0e-60 238.4 315 47.3
TPR.G25134 Trifolium pratense HOM05D005999 ORTHO05D003360 1.0e-60 238.4 296 47.0
Lsat_1_v5_gn_4_143840 Lactuca sativa HOM05D005999 ORTHO05D003360 4.4e-59 233.0 308 45.1
Ah.02g129080 Amaranthus hybridus HOM05D005999 ORTHO05D003360 5.7e-59 232.6 298 48.3
HanXRQChr09g0257041 Helianthus annuus HOM05D005999 ORTHO05D003360 5.7e-59 232.6 236 52.1
vmacro18444 Vaccinium macrocarpon HOM05D005999 ORTHO05D003360 9.7e-59 231.9 287 48.1
Migut.L00736 Erythranthe guttata HOM05D005999 ORTHO05D003360 1.3e-58 231.5 302 44.7
CAN.G865.12 Capsicum annuum HOM05D005999 ORTHO05D003360 8.2e-58 228.8 316 46.8
SGA_v2.0_scaffold58G20568 Striga asiatica HOM05D005999 ORTHO05D003360 1.4e-57 228.0 318 45.3
Aqoxy5G01092 Aquilegia oxysepala HOM05D005999 ORTHO05D002169 1.0e-55 221.9 323 45.5
MSTRG.3620 Avicennia marina HOM05D005999 ORTHO05D003360 5.5e-54 216.1 275 46.9
MBI05_g32278_MAGBIO Magnolia biondii HOM05D005999 ORTHO05D003360 2.1e-53 214.2 348 43.1
HPP92_001740 Vanilla planifolia HOM05D005999 ORTHO05D003360 6.1e-53 212.6 238 47.9
CDE05G3499 Ceratophyllum demersum HOM05D005999 ORTHO05D003360 1.0e-52 211.8 236 50.0
DCAR_011582 Daucus carota HOM05D005999 ORTHO05D003360 1.4e-52 211.5 307 46.6
Rhsim08G0029800 Rhododendron simsii HOM05D005999 ORTHO05D003360 8.8e-52 208.8 321 44.5
SalBow5G5732 Salvia bowleyana HOM05D005999 ORTHO05D003360 2.0e-51 207.6 322 41.6
Glyma.11G081900 Glycine max HOM05D005999 ORTHO05D003360 4.8e-50 203.0 295 45.4
COL.COLO4_22501 Corchorus olitorius HOM05D005999 ORTHO05D003360 1.4e-49 201.4 165 64.2
Medtr5g023090 Medicago truncatula HOM05D005999 ORTHO05D003360 2.4e-49 200.7 319 41.7
Phvul.002G103900 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 1.2e-45 188.3 304 44.4
ATR0661G352 Amborella trichopoda HOM05D005999 ORTHO05D003360 1.0e-44 185.3 353 36.8
VMungo1215G2992 Vigna mungo HOM05D005999 ORTHO05D003360 3.0e-44 183.7 303 42.9
Os03g0135600 Oryza sativa ssp. japonica HOM05D005999 ORTHO05D003360 1.0e-39 168.7 296 40.5
Cpa.g.sc6.318 Carica papaya HOM05D005999 ORTHO05D003360 2.2e-39 167.5 187 55.6
ECA232G4368 Erigeron canadensis HOM05D005999 ORTHO05D003360 4.7e-37 159.8 164 51.8
Zm00001eb002820 Zea mays HOM05D005999 ORTHO05D003360 1.4e-36 158.3 237 41.4
PSO017G5004 Papaver somniferum HOM05D005999 ORTHO05D003360 2.2e-34 151.0 287 39.0
Oeu020651.1 Olea europaea HOM05D005999 ORTHO05D003360 3.7e-34 150.2 281 41.3
Cpa.g.sc6.319 Carica papaya HOM05D005999 ORTHO05D003360 5.0e-31 139.8 93 75.3
AUR62026380 Chenopodium quinoa HOM05D005999 ORTHO05D003360 4.2e-30 136.7 90 72.2
AUR62026216 Chenopodium quinoa HOM05D005999 ORTHO05D003360 7.2e-30 136.0 152 50.0
Peaxi162Scf00439g00012 Petunia axillaris HOM05D005999 ORTHO05D003360 1.2e-24 118.6 179 44.7
SalBow3G2044 Salvia bowleyana HOM05D005999 ORTHO05D003360 1.7e-15 88.2 122 37.7
Zm00001eb170850 Zea mays HOM05D005999 ORTHO05D003360 1.9e-14 84.7 75 58.7
Zm00001eb211570 Zea mays HOM05D005999 ORTHO05D003360 1.6e-13 81.6 59 66.1
SalBow6G0049 Salvia bowleyana HOM05D005999 ORTHO05D003360 2.8e-13 80.9 122 34.4
SalBow6G2335 Salvia bowleyana HOM05D002275 ORTHO05D003360 4.7e-13 80.1 122 35.2
Zm00001eb242830 Zea mays HOM05D005999 ORTHO05D003360 6.2e-13 79.7 59 64.4
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 8.1e-13 79.3 128 35.2
MD02G1122900 Malus domestica HOM05D005999 ORTHO05D003360 1.5e-11 75.1 61 62.3
Pp3c8_14440 Physcomitrium patens HOM05D005999 ORTHO05D003360 4.4e-11 73.6 247 25.9
CANSAT01G1435 Cannabis sativa HOM05D005999 ORTHO05D003360 7.5e-11 72.8 46 69.6
RcHm_v2.0_Chr1g0316981 Rosa chinensis HOM05D005999 ORTHO05D003360 3.2e-09 67.4 42 69.0
RcHm_v2.0_Chr1g0316921 Rosa chinensis HOM05D005999 ORTHO05D003360 1.7e-07 61.6 38 68.4
CANSAT54G2046 Cannabis sativa HOM05D005999 ORTHO05D003360 3.3e-06 57.4 46 60.9


User provided reference genes

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