Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 3.5e-89 331.6 172 100.0
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 1.3e-83 313.2 172 94.2
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 7.1e-66 254.2 173 78.0
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 4.6e-65 251.5 171 77.2
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 3.5e-57 225.3 172 69.2
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 5.1e-56 221.5 172 68.6
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 5.6e-55 218.0 173 70.5
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 6.2e-54 214.5 165 67.9
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 1.4e-53 213.4 145 71.0
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 1.8e-53 213.0 172 66.3
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 2.0e-52 209.5 172 64.5
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 5.8e-52 208.0 174 63.2
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 7.6e-52 207.6 172 66.3
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 7.6e-52 207.6 145 71.7
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 2.4e-50 202.6 178 65.7
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 5.4e-50 201.4 172 65.7
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 5.4e-50 201.4 172 65.7
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 7.9e-49 197.6 146 70.5
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 1.0e-48 197.2 174 62.1
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 1.9e-47 193.0 143 67.1
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.9e-47 193.0 143 65.7
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 2.5e-47 192.6 174 62.1
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.6e-47 191.4 143 65.0
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 7.4e-47 191.0 143 65.0
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 3.7e-46 188.7 173 63.6
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 1.8e-45 186.4 175 56.6
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 5.8e-44 181.4 177 62.1
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.7e-43 179.9 172 63.4
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 1.7e-43 179.9 181 60.8
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.7e-43 179.9 156 60.9
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 2.9e-43 179.1 148 65.5
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 6.4e-43 177.9 179 58.7
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 6.4e-43 177.9 180 56.1
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 1.9e-42 176.4 175 56.0
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 1.2e-41 173.7 151 60.9
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.6e-41 173.3 161 61.5
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 7.9e-41 171.0 145 62.1
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 7.9e-41 171.0 185 56.8
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 1.9e-39 166.4 144 62.5
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 3.3e-39 165.6 162 59.3
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 3.3e-39 165.6 162 59.3
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 5.6e-39 164.9 151 60.3
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 2.1e-38 162.9 175 58.9
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 2.8e-38 162.5 147 61.2
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 6.9e-37 157.9 181 52.5
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 1.9e-34 149.8 173 53.8
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 1.9e-34 149.8 173 53.2
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 1.9e-34 149.8 179 54.7
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.2e-33 147.1 164 54.9
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 1.2e-33 147.1 173 52.6
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.6e-33 146.7 137 59.1
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 2.7e-33 146.0 152 55.3
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 3.5e-33 145.6 145 56.6
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 3.5e-33 145.6 179 53.1
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 4.6e-33 145.2 147 53.7
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 1.0e-32 144.1 147 55.1
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 1.0e-32 144.1 177 50.8
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 1.8e-32 143.3 173 52.0
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 2.3e-32 142.9 173 52.0
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 2.3e-32 142.9 173 52.0
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 3.0e-32 142.5 174 52.9
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 3.9e-32 142.1 155 55.5
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 6.7e-32 141.4 155 54.2
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 8.7e-32 141.0 155 55.5
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 8.7e-32 141.0 173 52.0
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 8.7e-32 141.0 173 52.0
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 8.7e-32 141.0 119 64.7
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 1.5e-31 140.2 161 53.4
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 4.3e-31 138.7 140 58.6
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 5.7e-31 138.3 147 53.1
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 5.7e-31 138.3 175 51.4
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 9.7e-31 137.5 187 49.2
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 9.7e-31 137.5 117 62.4
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 2.2e-30 136.3 127 55.9
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 4.8e-30 135.2 174 51.7
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 1.8e-29 133.3 173 50.9
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 2.4e-29 132.9 174 51.1
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 6.9e-29 131.3 140 52.9
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 3.4e-28 129.0 127 51.2
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 1.3e-27 127.1 137 53.3
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 2.2e-27 126.3 148 57.4
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 2.2e-27 126.3 144 49.3
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.1e-26 124.0 144 47.2
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 6.1e-25 118.2 93 69.9
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 6.1e-25 118.2 106 56.6
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 1.3e-24 117.1 145 49.7
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 6.7e-24 114.8 110 52.7
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.9e-23 113.2 105 55.2
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 6.3e-22 108.2 126 47.6
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 3.4e-20 102.4 99 57.6
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 3.4e-20 102.4 99 57.6
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 8.5e-19 97.8 87 62.1
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.9e-18 96.7 88 56.8
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 3.2e-18 95.9 126 53.2
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 5.1e-16 88.6 116 42.2
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 1.7e-14 83.6 155 46.5
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.8e-13 80.1 96 50.0
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 3.1e-13 79.3 112 43.8
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 6.9e-13 78.2 65 61.5
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 1.3e-11 73.9 55 61.8
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 4.2e-10 68.9 74 51.4
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 4.7e-09 65.5 91 47.3
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 1.3e-06 57.4 89 43.8


User provided reference genes

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