Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 0.0e+00 1167.5 725 100.0
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 0.0e+00 1099.3 685 93.6
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 1.2e-242 843.6 682 75.4
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 2.0e-202 709.9 685 65.5
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 2.0e-202 709.9 685 65.5
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 2.2e-201 706.4 705 67.0
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 7.3e-197 691.4 669 61.7
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 3.5e-191 672.5 704 64.6
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 1.7e-190 670.2 661 59.3
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 2.5e-189 666.4 699 64.5
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 2.4e-187 659.8 682 61.9
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 2.0e-186 656.8 686 62.5
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 2.6e-186 656.4 666 58.9
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 1.3e-185 654.1 667 63.0
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 2.4e-184 649.8 693 57.0
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 6.0e-183 645.2 684 60.8
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 1.7e-182 643.7 703 60.2
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 2.3e-182 643.3 713 58.2
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 4.8e-180 635.6 720 54.7
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 5.3e-179 632.1 695 59.9
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 3.4e-178 629.4 696 59.5
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 4.9e-177 625.5 704 60.1
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 4.2e-176 622.5 697 56.5
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 7.9e-175 618.2 654 61.9
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 3.1e-171 606.3 707 57.0
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 4.5e-170 602.4 664 59.9
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 4.5e-170 602.4 716 57.3
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 2.4e-168 596.7 719 52.6
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.6e-167 594.0 697 59.8
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 2.7e-167 593.2 709 58.5
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 1.8e-166 590.5 694 55.2
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 1.3e-164 584.3 516 64.1
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 5.3e-163 578.9 694 57.1
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 2.0e-162 577.0 691 55.1
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 2.6e-162 576.6 723 56.8
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 1.3e-161 574.3 714 57.4
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 6.5e-161 572.0 711 58.5
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 5.5e-160 568.9 711 57.0
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 2.1e-159 567.0 692 56.8
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 3.5e-159 566.2 670 55.5
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 3.9e-158 562.8 724 55.0
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 4.3e-157 559.3 712 54.6
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 1.3e-156 557.8 669 57.4
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 1.3e-156 557.8 702 55.7
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 3.7e-156 556.2 697 54.2
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 4.8e-156 555.8 667 56.1
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 3.4e-154 549.7 673 57.9
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 1.0e-153 548.1 675 55.9
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 5.0e-153 545.8 699 55.2
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 2.5e-152 543.5 662 56.0
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 3.9e-150 536.2 686 52.3
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 6.7e-150 535.4 698 55.7
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 1.2e-146 524.6 719 51.0
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 2.6e-146 523.5 709 54.9
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 3.4e-146 523.1 673 55.9
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 5.9e-146 522.3 692 55.8
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 1.3e-145 521.2 655 55.1
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 1.7e-145 520.8 670 52.8
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 3.8e-145 519.6 719 50.5
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 6.5e-145 518.8 745 46.7
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 1.9e-144 517.3 514 58.6
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 1.9e-144 517.3 718 53.8
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 3.2e-144 516.5 669 54.1
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 2.3e-142 510.4 700 49.3
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 2.0e-141 507.3 709 52.3
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 2.6e-141 506.9 700 48.3
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 4.4e-141 506.1 696 52.0
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 7.4e-141 505.4 691 49.8
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 9.1e-139 498.4 690 48.3
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 2.1e-135 487.3 739 50.5
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 3.9e-134 483.0 704 49.1
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 9.7e-133 478.4 694 49.1
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 2.2e-132 477.2 560 53.6
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 2.8e-132 476.9 708 50.1
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 2.6e-130 470.3 719 50.1
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 5.5e-128 462.6 527 53.7
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.7e-127 460.3 700 44.7
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 2.3e-126 457.2 513 56.1
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 5.7e-125 452.6 663 50.8
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 2.2e-124 450.7 323 72.4
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 6.3e-124 449.1 508 52.4
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 5.0e-121 439.5 699 49.1
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.1e-120 438.3 409 62.8
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 2.1e-119 434.1 680 47.4
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 1.4e-118 431.4 733 50.8
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 1.5e-117 427.9 711 50.2
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 2.0e-117 427.6 537 50.1
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 3.4e-117 426.8 629 44.2
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 4.2e-112 409.8 718 47.8
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 8.0e-111 405.6 686 46.1
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.8e-110 404.4 731 46.4
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 3.0e-110 403.7 519 50.3
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 4.0e-110 403.3 691 47.6
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 8.3e-108 395.6 364 64.6
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 1.1e-107 395.2 716 47.8
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 5.4e-107 392.9 689 46.7
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 1.5e-104 384.8 679 47.1
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 7.3e-104 382.5 687 46.1
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.7e-100 371.3 723 37.2
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 1.2e-98 365.2 385 60.8
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 2.8e-95 354.0 712 42.3
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 1.2e-93 348.6 695 42.9
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 3.2e-91 340.5 722 36.4
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 9.2e-91 339.0 687 44.0
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 1.0e-89 335.5 628 38.2
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 5.8e-85 319.7 613 37.8
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 1.3e-84 318.5 237 72.6
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 5.1e-81 306.6 557 39.7
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 2.4e-78 297.7 335 63.0
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 9.2e-75 285.8 474 43.2
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 1.6e-63 248.4 868 27.6
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 9.9e-61 239.2 195 62.6
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 4.9e-60 236.9 198 57.1
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 2.5e-56 224.6 276 56.5
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 9.0e-54 216.1 698 31.7
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 9.0e-54 216.1 259 57.1
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.3e-52 212.2 515 34.8
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 2.1e-50 204.9 247 55.9
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 2.0e-45 188.3 751 29.8
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 3.9e-41 174.1 433 34.2
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 8.7e-41 172.9 270 44.8
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 1.3e-39 169.1 257 43.2
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 2.8e-39 167.9 890 28.7
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 1.8e-38 165.2 259 43.6
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 7.7e-29 133.3 111 60.4
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 3.2e-27 127.9 273 39.2
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 1.4e-25 122.5 185 46.5
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.4e-22 112.5 102 62.7
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 4.1e-22 110.9 353 30.6
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 5.3e-22 110.5 119 55.5
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 4.5e-21 107.5 99 50.5
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 5.0e-20 104.0 188 48.9
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 4.2e-19 100.9 150 44.7
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 2.1e-18 98.6 166 43.4
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 2.7e-18 98.2 75 64.0
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 8.0e-18 96.7 281 29.5
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 9.7e-16 89.7 127 46.5
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 3.1e-14 84.7 83 56.6
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 2.0e-13 82.0 74 59.5
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 7.7e-13 80.1 60 66.7
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 1.5e-11 75.9 212 30.2
Nn1g05556 Nelumbo nucifera HOM05D004723 ORTHO05D006176 5.5e-11 73.9 48 64.6
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 8.0e-10 70.1 216 30.6
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 8.8e-09 66.6 69 46.4
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 2.0e-08 65.5 72 45.8
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 2.0e-08 65.5 72 45.8
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 3.4e-08 64.7 91 45.1
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 5.7e-08 63.9 73 49.3
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 9.8e-08 63.2 72 44.4
C03p39770 Brassica napus HOM05D059891 ORTHO05D040930 2.8e-07 61.6 69 49.3
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 6.3e-07 60.5 60 46.7
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 2.4e-06 58.5 60 45.0
Eucgr.C02078 Eucalyptus grandis HOM05D000238 ORTHO05D010253 5.4e-06 57.4 30 80.0


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