Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 2.7e-68 262.3 180 100.0
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 1.3e-65 253.4 180 88.3
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.0e-46 190.7 184 64.7
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.4e-40 169.5 184 64.7
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.2e-34 150.6 189 49.7
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.3e-33 147.1 188 55.9
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 2.8e-33 146.0 175 63.4
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.4e-32 143.7 186 48.9
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.8e-32 143.3 188 55.3
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 2.4e-32 142.9 84 78.6
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 7.0e-32 141.4 194 63.9
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.2e-31 140.6 188 53.7
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 2.0e-31 139.8 188 55.9
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 3.5e-31 139.0 87 78.2
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 7.7e-31 137.9 89 73.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.0e-30 137.5 184 54.3
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.7e-30 136.7 82 79.3
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 2.3e-30 136.3 85 76.5
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 6.5e-30 134.8 182 59.9
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.5e-30 134.8 182 59.9
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.1e-29 134.0 78 80.8
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.5e-29 133.7 177 59.9
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.9e-29 133.3 182 59.9
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 3.2e-29 132.5 177 60.5
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 3.2e-29 132.5 87 72.4
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 9.5e-29 131.0 82 75.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.6e-28 130.2 84 71.4
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.1e-28 129.8 84 71.4
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 3.6e-28 129.0 90 70.0
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 4.7e-28 128.6 81 77.8
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 6.1e-28 128.3 70 81.4
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 8.0e-28 127.9 80 75.0
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 8.0e-28 127.9 85 71.8
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.0e-27 127.5 71 80.3
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 1.8e-27 126.7 70 81.4
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.8e-27 126.7 80 71.2
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 3.0e-27 125.9 84 71.4
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 3.0e-27 125.9 70 80.0
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 5.2e-27 125.2 73 78.1
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 5.2e-27 125.2 73 78.1
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 5.2e-27 125.2 83 71.1
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 5.2e-27 125.2 83 71.1
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 6.8e-27 124.8 71 77.5
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 8.8e-27 124.4 72 76.4
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.5e-26 123.6 69 76.8
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.0e-26 123.2 83 69.9
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.0e-26 123.2 70 78.6
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 2.0e-26 123.2 73 75.3
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.0e-26 123.2 81 72.8
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 2.6e-26 122.9 85 68.2
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 2.6e-26 122.9 71 77.5
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 2.6e-26 122.9 78 71.8
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 3.4e-26 122.5 71 78.9
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 4.4e-26 122.1 71 77.5
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.4e-26 122.1 81 71.6
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 5.7e-26 121.7 86 67.4
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 5.7e-26 121.7 73 74.0
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 5.7e-26 121.7 69 76.8
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 7.5e-26 121.3 85 64.7
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 7.5e-26 121.3 85 64.7
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 7.5e-26 121.3 85 65.9
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 9.8e-26 120.9 73 76.7
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 9.8e-26 120.9 73 76.7
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.3e-25 120.6 85 63.5
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.7e-25 120.2 85 64.7
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.7e-25 120.2 85 64.7
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.7e-25 120.2 85 64.7
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.7e-25 120.2 84 65.5
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.7e-25 120.2 84 65.5
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.7e-25 120.2 78 73.1
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.7e-25 120.2 71 74.6
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 2.8e-25 119.4 69 76.8
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 3.7e-25 119.0 88 67.0
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 3.7e-25 119.0 76 67.1
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 3.7e-25 119.0 84 67.9
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 8.3e-25 117.9 69 75.4
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 8.3e-25 117.9 69 75.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 8.3e-25 117.9 70 74.3
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 8.3e-25 117.9 87 65.5
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.4e-24 117.1 69 72.5
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.8e-24 116.7 70 70.0
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.8e-24 116.7 70 74.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 2.4e-24 116.3 69 73.9
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.4e-24 116.3 71 69.0
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 7.8e-23 111.3 70 71.4
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.7e-22 110.2 67 70.1
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 2.3e-22 109.8 169 50.9
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 4.3e-21 105.5 85 56.5
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 4.3e-21 105.5 66 74.2
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 5.6e-21 105.1 68 66.2
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 5.6e-21 105.1 68 66.2
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.1e-20 103.2 72 63.9
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 4.7e-20 102.1 58 77.6
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.4e-19 100.5 58 75.9
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 5.2e-19 98.6 59 74.6
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.5e-18 97.1 63 71.4
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 4.4e-18 95.5 71 64.8
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 9.8e-18 94.4 68 66.2
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.6e-15 87.0 67 58.2
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 1.7e-06 57.0 62 45.2
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 3.0e-06 56.2 57 40.4


User provided reference genes

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