Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.4e-292 1008.1 491 100.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 3.6e-216 755.0 452 84.1
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.3e-194 683.3 397 82.4
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 5.7e-193 677.9 397 82.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 3.2e-180 635.6 398 76.1
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 6.1e-179 631.3 397 73.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 8.8e-178 627.5 397 74.3
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 8.2e-176 620.9 411 70.6
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 2.4e-175 619.4 398 73.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.2e-174 617.1 401 74.3
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.0e-174 616.3 399 73.4
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 4.5e-174 615.1 397 73.3
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 5.9e-174 614.8 395 73.9
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 8.0e-171 604.4 409 70.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 3.9e-170 602.1 398 71.4
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 5.2e-170 601.7 398 71.4
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.1e-169 600.5 398 70.1
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.5e-169 600.1 430 67.9
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.5e-169 600.1 411 70.6
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.6e-169 599.4 397 70.0
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.7e-168 596.7 387 73.4
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.8e-168 595.9 418 67.9
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 2.8e-168 595.9 418 69.1
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 4.8e-168 595.1 388 72.2
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.4e-167 593.6 401 70.1
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 1.8e-167 593.2 401 68.6
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 4.1e-167 592.0 405 69.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 9.1e-167 590.9 404 68.8
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.6e-166 590.1 403 68.7
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.3e-165 587.0 400 68.8
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 2.2e-165 586.3 400 68.5
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 6.5e-165 584.7 397 68.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 8.5e-165 584.3 398 68.8
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.9e-164 583.2 385 71.7
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 4.2e-164 582.0 370 73.5
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.4e-164 580.9 400 67.8
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.6e-163 580.1 397 68.8
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 6.1e-163 578.2 395 68.1
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.0e-162 575.9 397 69.3
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 4.0e-162 575.5 387 70.3
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 8.8e-162 574.3 393 69.0
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.5e-161 573.5 399 69.2
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 5.7e-161 571.6 397 67.8
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 7.5e-161 571.2 395 67.3
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 9.7e-161 570.9 395 68.4
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.3e-160 570.5 397 67.5
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-159 567.4 409 65.5
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.4e-159 566.2 400 66.5
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 5.3e-159 565.1 353 74.8
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 7.0e-159 564.7 388 67.3
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 9.1e-159 564.3 389 66.8
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 3.5e-158 562.4 410 64.6
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.5e-158 562.4 426 65.0
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.0e-157 560.8 399 67.7
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.3e-157 560.5 388 66.8
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 1.3e-157 560.5 388 66.8
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.7e-157 560.1 389 66.3
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 5.0e-157 558.5 388 67.0
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 8.5e-157 557.8 422 64.0
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 3.2e-156 555.8 439 61.0
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 9.4e-156 554.3 396 65.2
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.2e-155 553.9 405 67.9
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.6e-155 553.5 394 65.0
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.0e-153 546.6 420 61.7
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.4e-153 545.4 417 62.1
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 5.7e-153 545.0 412 65.8
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 9.8e-153 544.3 395 65.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 4.1e-151 538.9 390 65.1
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 7.0e-151 538.1 393 64.6
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.1e-148 530.8 411 62.5
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.5e-145 520.4 397 61.2
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 4.9e-144 515.4 365 65.5
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.1e-143 514.2 395 62.8
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 5.6e-140 501.9 456 55.7
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 2.8e-139 499.6 398 61.6
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.3e-138 496.5 351 68.1
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 5.2e-138 495.4 440 56.8
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 4.4e-137 492.3 370 61.1
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.2e-134 484.2 343 63.8
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.2e-134 484.2 390 61.5
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.6e-129 466.5 350 62.9
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 9.8e-129 464.5 423 54.1
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.2e-126 457.6 405 60.0
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.0e-125 453.0 334 65.9
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.6e-125 451.8 289 75.1
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.1e-122 444.5 359 58.2
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.3e-117 427.6 346 60.7
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.9e-111 407.1 311 60.8
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.7e-109 400.6 397 50.6
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 3.0e-101 373.2 254 69.7
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 9.3e-95 351.7 430 49.3
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 2.1e-94 350.5 212 71.7
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 6.0e-94 349.0 251 65.3
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.3e-93 347.8 390 46.7
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.5e-92 343.6 252 65.5
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.7e-88 330.9 339 49.3
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.3e-83 314.7 405 41.2
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.1e-82 311.6 368 44.6
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.6e-81 307.0 393 46.3
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.0e-80 302.8 371 42.6
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 5.0e-80 302.8 402 43.0
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.1e-68 265.0 201 62.7
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 4.8e-67 259.6 182 63.7
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.4e-63 248.1 221 56.6
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 7.4e-60 235.7 212 54.7
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.3e-59 235.0 182 59.3
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.4e-58 230.7 194 57.7
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 4.7e-54 216.5 137 73.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 3.7e-51 206.8 127 74.8
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 3.1e-50 203.8 119 76.5
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 3.6e-46 190.3 304 37.5
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 8.0e-46 189.1 298 41.3
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 2.5e-39 167.5 100 71.0
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.4e-37 161.8 107 68.2
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.5e-31 141.7 134 48.5
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 2.9e-27 127.5 107 59.8
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 2.4e-26 124.4 129 45.0
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-16 92.4 80 57.5
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.9e-11 74.3 114 36.8
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 2.7e-09 67.8 42 78.6
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 3.6e-06 57.4 64 53.1


User provided reference genes

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