Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006894 Carpinus fangiana HOM05D004004 ORTHO05D003284 1.1e-54 216.5 112 100.0
Cfa006895 Carpinus fangiana HOM05D004004 ORTHO05D003284 6.9e-38 160.6 105 78.1
Haze_03875 Corylus avellana HOM05D004004 ORTHO05D003284 2.7e-34 148.7 105 73.3
Haze_03857 Corylus avellana HOM05D004004 ORTHO05D003284 6.1e-34 147.5 105 72.4
Dinv40018 Davidia involucrata HOM05D004004 ORTHO05D003284 4.4e-24 114.8 105 61.0
CSS0049012 Camellia sinensis var. sinensis HOM05D004004 ORTHO05D003284 8.2e-23 110.5 115 60.0
CiPaw.08G139700 Carya illinoinensis HOM05D004004 ORTHO05D003284 1.4e-22 109.8 105 58.1
QL06p035435 Quercus lobata HOM05D004004 ORTHO05D003284 9.1e-22 107.1 109 58.7
CiPaw.07G049200 Carya illinoinensis HOM05D004004 ORTHO05D003284 2.6e-21 105.5 111 55.0
Potri.007G021200 Populus trichocarpa HOM05D004004 ORTHO05D003284 1.7e-20 102.8 111 61.3
TPR.G2394 Trifolium pratense HOM05D004004 ORTHO05D003284 5.0e-20 101.3 120 48.3
CiPaw.08G139600 Carya illinoinensis HOM05D004004 ORTHO05D003284 6.5e-20 100.9 112 47.3
ECA238G4041 Erigeron canadensis HOM05D004004 ORTHO05D003284 1.5e-19 99.8 121 52.9
Lj2g0016762 Lotus japonicus HOM05D004004 ORTHO05D003284 1.9e-19 99.4 120 56.7
Nitab4.5_0005980g0010 Nicotiana tabacum HOM05D004004 ORTHO05D003284 3.2e-19 98.6 113 53.1
MD15G1256400 Malus domestica HOM05D004004 ORTHO05D003284 4.2e-19 98.2 106 63.2
PGR119G0532 Punica granatum HOM05D004004 ORTHO05D003284 4.2e-19 98.2 116 59.5
Migut.L00026 Erythranthe guttata HOM05D004004 ORTHO05D003284 1.6e-18 96.3 106 50.9
Prupe.7G158500 Prunus persica HOM05D004004 ORTHO05D003284 1.6e-18 96.3 105 61.0
Nitab4.5_0003001g0020 Nicotiana tabacum HOM05D004004 ORTHO05D003284 2.7e-18 95.5 109 52.3
Peaxi162Scf00418g00071 Petunia axillaris HOM05D004004 ORTHO05D003284 2.7e-18 95.5 116 54.3
RcHm_v2.0_Chr2g0100871 Rosa chinensis HOM05D004004 ORTHO05D003284 2.7e-18 95.5 105 60.0
Potri.005G120200 Populus trichocarpa HOM05D004004 ORTHO05D003284 3.6e-18 95.1 109 56.0
CANSAT01G1672 Cannabis sativa HOM05D004004 ORTHO05D003284 6.1e-18 94.4 115 45.2
Duzib187G1158 Durio zibethinus HOM05D004004 ORTHO05D003284 6.1e-18 94.4 110 50.0
Sopen02g029610 Solanum pennellii HOM05D004004 ORTHO05D003284 8.0e-18 94.0 110 50.9
Cpa.g.sc6.165 Carica papaya HOM05D004004 ORTHO05D003284 1.4e-17 93.2 112 58.0
Phvul.002G033800 Phaseolus vulgaris HOM05D004004 ORTHO05D003284 1.4e-17 93.2 119 53.8
PGSC0003DMG400038828 Solanum tuberosum HOM05D004004 ORTHO05D003284 1.4e-17 93.2 114 49.1
TWI53G0327 Tripterygium wilfordii HOM05D004004 ORTHO05D003284 1.8e-17 92.8 119 56.3
Lsat_1_v5_gn_2_77720 Lactuca sativa HOM05D004004 ORTHO05D003284 2.3e-17 92.4 112 53.6
Ciclev10027136m.g Citrus clementina HOM05D004004 ORTHO05D003284 5.2e-17 91.3 106 52.8
FAN23G2735 Fragaria x ananassa HOM05D004004 ORTHO05D003284 5.2e-17 91.3 106 59.4
Glyma.11G071500 Glycine max HOM05D004004 ORTHO05D003284 5.2e-17 91.3 109 59.6
FAN28G2460 Fragaria x ananassa HOM05D004004 ORTHO05D003284 8.8e-17 90.5 107 59.8
Medtr5g020960 Medicago truncatula HOM05D004004 ORTHO05D003284 8.8e-17 90.5 135 49.6
FvH4_1g12761 Fragaria vesca HOM05D004004 ORTHO05D003284 1.2e-16 90.1 106 58.5
SalBow5G1136 Salvia bowleyana HOM05D004004 ORTHO05D003284 1.2e-16 90.1 105 56.2
DCAR_025966 Daucus carota HOM05D004004 ORTHO05D003284 3.3e-16 88.6 141 44.7
Sabra07G0018100 Salix brachista HOM05D004004 ORTHO05D003284 5.7e-16 87.8 114 53.5
HanXRQChr14g0440621 Helianthus annuus HOM05D004004 ORTHO05D003284 2.8e-15 85.5 55 69.1
MD02G1143000 Malus domestica HOM05D004004 ORTHO05D003284 2.8e-15 85.5 106 51.9
VMungo1215G3070 Vigna mungo HOM05D004004 ORTHO05D003284 2.8e-15 85.5 115 45.2
Hund13999 Selenicereus undatus HOM05D004004 ORTHO05D003284 3.7e-15 85.1 115 52.2
Lj4P206T16 Lonicera japonica HOM05D004004 ORTHO05D003284 4.8e-15 84.7 126 48.4
Solyc02g084940.1 Solanum lycopersicum HOM05D004004 ORTHO05D003284 4.8e-15 84.7 105 55.2
HanXRQChr14g0440601 Helianthus annuus HOM05D004004 ORTHO05D003284 6.3e-15 84.3 79 57.0
Eucgr.I02406 Eucalyptus grandis HOM05D004004 ORTHO05D003284 8.2e-15 84.0 112 43.8
FAN26G1971 Fragaria x ananassa HOM05D008813 ORTHO05D003284 8.2e-15 84.0 51 78.4
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.1e-14 83.6 51 76.5
AUR62015036 Chenopodium quinoa HOM05D004004 ORTHO05D003284 1.8e-14 82.8 106 52.8
Actinidia19203 Actinidia chinensis HOM05D004004 ORTHO05D003284 2.4e-14 82.4 106 55.7
Aqoxy6G01170 Aquilegia oxysepala HOM05D004004 ORTHO05D003284 3.1e-14 82.0 121 46.3
Thecc.01G030100 Theobroma cacao HOM05D004004 ORTHO05D003284 4.1e-14 81.6 102 54.9
Nn1g04907 Nelumbo nucifera HOM05D004004 ORTHO05D003284 7.0e-14 80.9 110 46.4
Psat2g157480 Pisum sativum HOM05D010322 ORTHO05D012006 2.0e-13 79.3 120 45.8
TAR381G1189 Trochodendron aralioides HOM05D004004 ORTHO05D003284 2.0e-13 79.3 113 44.2
Ah.02g125000 Amaranthus hybridus HOM05D004004 ORTHO05D003284 2.7e-13 79.0 104 46.2
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 2.7e-13 79.0 59 64.4
Gohir.A12G062900 Gossypium hirsutum HOM05D004004 ORTHO05D003284 7.7e-13 77.4 48 70.8
Gorai.008G065800 Gossypium raimondii HOM05D004004 ORTHO05D003284 7.7e-13 77.4 48 70.8
Nn5g29686 Nelumbo nucifera HOM05D004004 ORTHO05D003284 7.7e-13 77.4 113 42.5
PSO541G0719 Papaver somniferum HOM05D004004 ORTHO05D003284 1.0e-12 77.0 54 66.7
Manes.01G138700 Manihot esculenta HOM05D004004 ORTHO05D003284 1.3e-12 76.6 112 54.5
Gohir.D12G062800 Gossypium hirsutum HOM05D004004 ORTHO05D003284 1.7e-12 76.3 48 68.8
Duzib147G0117 Durio zibethinus HOM05D004004 ORTHO05D003284 3.8e-12 75.1 48 70.8
CAN.G358.44 Capsicum annuum HOM05D004004 ORTHO05D003284 1.9e-11 72.8 116 50.9
Manes.02G097000 Manihot esculenta HOM05D004004 ORTHO05D003284 1.9e-11 72.8 103 55.3
ECA238G0774 Erigeron canadensis HOM05D004004 ORTHO05D003284 2.5e-11 72.4 111 50.5
MBI10_g00769_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 5.5e-11 71.2 46 71.7
Lsat_1_v5_gn_2_77660 Lactuca sativa HOM05D004004 ORTHO05D003284 9.4e-11 70.5 112 42.0
MELO3C007853.2 Cucumis melo HOM05D004004 ORTHO05D003284 1.2e-10 70.1 56 66.1
EL10As8g23910 Beta vulgaris HOM05D004004 ORTHO05D003284 3.6e-10 68.6 48 60.4
CsaV3_6G046550 Cucumis sativus L. HOM05D004004 ORTHO05D003284 4.7e-10 68.2 56 64.3
PSO675G0710 Papaver somniferum HOM05D004004 ORTHO05D003284 6.1e-10 67.8 46 67.4
Zm00001eb432750 Zea mays HOM05D004004 ORTHO05D003284 2.3e-09 65.9 53 60.4
CANSAT80G0904 Cannabis sativa HOM05D004004 ORTHO05D003284 3.0e-09 65.5 106 38.7
ClCG01G019820 Citrullus lanatus HOM05D004004 ORTHO05D003284 4.0e-09 65.1 56 58.9
Psat2g157520 Pisum sativum HOM05D004004 ORTHO05D003284 5.2e-09 64.7 55 54.5
Sed0026549 Sechium edule HOM05D004004 ORTHO05D003284 5.2e-09 64.7 53 66.0
Oeu000178.1 Olea europaea HOM05D004004 ORTHO05D003284 8.8e-09 63.9 108 38.0
Aqoxy6G01169 Aquilegia oxysepala HOM05D004004 ORTHO05D003284 2.0e-08 62.8 45 64.4
CSS0023371 Camellia sinensis var. sinensis HOM05D004004 ORTHO05D003284 2.0e-08 62.8 109 35.8
Os04g0661100 Oryza sativa ssp. japonica HOM05D004004 ORTHO05D003284 2.6e-08 62.4 45 62.2
GSVIVG01036224001 Vitis vinifera HOM05D004004 ORTHO05D003284 2.6e-08 62.4 106 35.8
Dinv42931 Davidia involucrata HOM05D004004 ORTHO05D003284 4.4e-08 61.6 50 50.0
Dinv43169 Davidia involucrata HOM05D004004 ORTHO05D003284 4.4e-08 61.6 50 50.0
Prupe.8G018500 Prunus persica HOM05D004004 ORTHO05D003284 4.4e-08 61.6 54 48.1
FvH4_2g14710 Fragaria vesca HOM05D004004 ORTHO05D003284 9.8e-08 60.5 53 49.1
FAN15G2223 Fragaria x ananassa HOM05D004004 ORTHO05D003284 9.8e-08 60.5 53 49.1
FAN24G1883 Fragaria x ananassa HOM05D004004 ORTHO05D003284 9.8e-08 60.5 53 49.1
Dinv42932 Davidia involucrata HOM05D004004 ORTHO05D003284 1.7e-07 59.7 50 48.0
Dinv43168 Davidia involucrata HOM05D004004 ORTHO05D003284 1.7e-07 59.7 50 48.0
SEGI_28805 Sequoiadendron giganteum HOM05D000002 ORTHO05D003284 2.8e-07 58.9 52 51.9
TAR633G0312 Trochodendron aralioides HOM05D004004 ORTHO05D003284 2.8e-07 58.9 83 38.6
Atru.chr12.1510 Acer truncatum HOM05D004004 ORTHO05D003284 3.7e-07 58.5 58 48.3
Hund05396 Selenicereus undatus HOM05D004004 ORTHO05D003284 3.7e-07 58.5 48 50.0
vmacro22230 Vaccinium macrocarpon HOM05D004004 ORTHO05D003284 3.7e-07 58.5 54 50.0
FvH4_2g14740 Fragaria vesca HOM05D004004 ORTHO05D003284 4.8e-07 58.2 54 48.1
Potri.018G148900 Populus trichocarpa HOM05D004004 ORTHO05D003284 4.8e-07 58.2 56 50.0
QL03p011303 Quercus lobata HOM05D004004 ORTHO05D003284 4.8e-07 58.2 50 44.0
CDE08G1315 Ceratophyllum demersum HOM05D004004 ORTHO05D003284 1.4e-06 56.6 107 37.4
Prupe.1G549900 Prunus persica HOM05D004004 ORTHO05D003284 1.4e-06 56.6 55 47.3
PGR031G3823 Punica granatum HOM05D004004 ORTHO05D003284 1.4e-06 56.6 55 45.5
Rhsim07G0216600 Rhododendron simsii HOM05D004004 ORTHO05D003284 1.4e-06 56.6 47 46.8
Migut.N00981 Erythranthe guttata HOM05D004004 ORTHO05D003284 1.8e-06 56.2 50 52.0
MBI18_g28925_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 2.4e-06 55.8 106 34.9
HanXRQChr09g0250491 Helianthus annuus HOM05D000607 ORTHO05D003284 3.1e-06 55.5 54 42.6
SEGI_40269 Sequoiadendron giganteum HOM05D004004 ORTHO05D003284 3.1e-06 55.5 54 46.3
AUR62033201 Chenopodium quinoa HOM05D004004 ORTHO05D003284 5.4e-06 54.7 54 44.4
Nn1g09210 Nelumbo nucifera HOM05D004004 ORTHO05D003284 5.4e-06 54.7 56 39.3
Oeu025680.1 Olea europaea HOM05D004004 ORTHO05D003284 5.4e-06 54.7 55 47.3
Potri.006G079400 Populus trichocarpa HOM05D004004 ORTHO05D003284 5.4e-06 54.7 109 35.8
Nn1g09207 Nelumbo nucifera HOM05D004004 ORTHO05D003284 7.0e-06 54.3 80 33.8
Rhsim07G0216700 Rhododendron simsii HOM05D004004 ORTHO05D003284 7.0e-06 54.3 53 43.4
Sed0007242 Sechium edule HOM05D004004 ORTHO05D003284 7.0e-06 54.3 61 52.5
TAR381G0545 Trochodendron aralioides HOM05D000607 ORTHO05D003284 7.0e-06 54.3 55 50.9
CDE06G0974 Ceratophyllum demersum HOM05D004004 ORTHO05D003284 9.1e-06 53.9 106 35.8
RcHm_v2.0_Chr6g0301541 Rosa chinensis HOM05D004004 ORTHO05D003284 9.1e-06 53.9 55 49.1
TWI12G0300 Tripterygium wilfordii HOM05D000607 ORTHO05D003284 9.1e-06 53.9 50 42.0


User provided reference genes

Program Settings